Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 126 a.a., transcriptional activator RfaH from Marinobacter adhaerens HP15

 Score = 71.2 bits (173), Expect = 6e-18
 Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 10/127 (7%)

Query: 35  VEKILRGKRQMVQEPLFPSYMFVRFDFENGPSFTTVRSTRGVVDFVRLGPHPRELQGDLI 94
           +EKI  GKR    EPLFP Y+FV  + +  P ++ +RSTRGV+  V     P  +   +I
Sbjct: 1   MEKIKGGKRSKKLEPLFPGYLFVNLE-QTDPMWSKLRSTRGVLRIVGFANKPAPISDAVI 59

Query: 95  YQLKQLDCEQLKHATKQLPEK-GQTVRVARGQFAGIEAIYLEPDGDTRSIMLVKMISQQ- 152
             +K    + L    +Q   K GQ V+++ G F GI AI+   DG+ R+I+LV  + +Q 
Sbjct: 60  QHIK----DSLDSVAEQGGIKPGQAVQLSEGPFEGINAIFQAYDGEERAIVLVSFMQKQQ 115

Query: 153 ---VPMS 156
              VP+S
Sbjct: 116 SIRVPVS 122