Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 163 a.a., Transcription antitermination protein RfaH from Enterobacter sp. TBS_079

 Score =  150 bits (378), Expect = 1e-41
 Identities = 77/163 (47%), Positives = 110/163 (67%), Gaps = 4/163 (2%)

Query: 1   MKRWYLLYCKRGEQQRAKMHLENQSVECFYPEVCVEKILRGKRQMVQEPLFPSYMFVRFD 60
           M+ WYLLYCKRG+ QRA+ HLE QSV C  P + +EK+ RGKR  V EPLFP+Y+FV FD
Sbjct: 1   MQAWYLLYCKRGQLQRAQEHLERQSVNCLTPVITLEKMQRGKRTTVSEPLFPNYLFVEFD 60

Query: 61  FENGPSFTTVRSTRGVVDFVRLGPHPRELQGDLIYQLKQLDCEQLKHAT-KQLPEKGQTV 119
            E   + TT+ +TRGV  FVR G HP  +   +I+QL     +Q +  T  + P  G +V
Sbjct: 61  PEVIHT-TTISATRGVSHFVRFGAHPATVPSTVIHQLSVY--QQPEGITDPETPYAGDSV 117

Query: 120 RVARGQFAGIEAIYLEPDGDTRSIMLVKMISQQVPMSIENTDW 162
            +  G F G++AI+ EPDG+ RS++L+ ++++QV  S++NTD+
Sbjct: 118 VITEGAFEGLQAIFAEPDGEARSMLLLNLLNKQVLQSVKNTDF 160