Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 177 a.a., NusG antitermination factor (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 41.6 bits (96), Expect = 7e-09
 Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 14/171 (8%)

Query: 2   KRWYLLYC------KRGEQQR---AKMHLENQSVECFYPEVCVEKILRGKRQMVQEPLFP 52
           KRWY +        K  EQ +   A+  LE+   E   P   V ++ RGK+   +    P
Sbjct: 3   KRWYSVSVLSNFEKKIAEQIKHAVAEAGLEDDIEEVLVPTEEVIEVRRGKKVTAERRFMP 62

Query: 53  SYMFVRFDFENGPSFTTVRSTRGVVDFVRLGPHPRELQGDLIYQLKQLDCEQLKHATKQL 112
            Y+ VR +  +   +  + S   V  F+     P  ++ D + Q+     E+ + A + L
Sbjct: 63  GYVLVRMEMTD-QGYHLINSINRVTGFLGPQGRPMAMRDDEVNQILN-RVEEGQEAPRSL 120

Query: 113 P--EKGQTVRVARGQFAGIEAIYLEPDGDTRSI-MLVKMISQQVPMSIENT 160
              + G+ V V  G F G      E D D   + + V +  +  P+ +E T
Sbjct: 121 ITFDIGEQVNVTDGPFEGFSGSVEEVDDDNNRLKVTVSIFGRATPVELEFT 171