Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Di-/tripeptide transporter from Xanthomonas campestris pv. campestris strain 8004

 Score =  224 bits (572), Expect = 4e-63
 Identities = 153/489 (31%), Positives = 246/489 (50%), Gaps = 29/489 (5%)

Query: 31  PNAFYLIFSIEFWERFGFYGMQAILTVYMV-KIMGMDESASFVL---FGAFSALVYGFVA 86
           P   +++F  EFWERF FYG++  L +Y+V +  G + S        +GA+ ALVY    
Sbjct: 30  PRPLWMLFMTEFWERFAFYGIRWALVLYIVAQFFGGEASGQAPAGRTYGAYLALVYAAAI 89

Query: 87  IGGWIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGNGLFK 146
            GG++ D+V+G +R+I +GA VM  G  L+ +           +  I +  + VGNGLFK
Sbjct: 90  FGGYVADRVLGYQRSILVGAAVMATGLFLIAVPNH-------VVFEIGLATVVVGNGLFK 142

Query: 147 ANPSSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLVAIKM-------GYGMAF 199
            N S+++ K+Y   DPR D  FT++YM INLG+  S ++T L+A K+        Y M F
Sbjct: 143 PNISTMVGKLYSVADPRRDSGFTIFYMGINLGAMISPVLTQLLAEKVFGTEAMPSYKMVF 202

Query: 200 GVSAVGLAITVVNFLFCLRMLKGTGSPADLMPVNKMYLVLVAVGSIIASLVCSYLL--QN 257
             S VG+ I++V F    R L G G+PA       M  VL+ +G  + S+   Y L    
Sbjct: 203 MASGVGMLISLVWFWIGRRQLAGIGAPAP--NAQGMGRVLMVLGGCLVSIPVVYFLLAVG 260

Query: 258 LTLAHGILVVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQGVVFFVLYFQMPTSLNF 317
             +   +L V  + +      E      ++R K++   I+    V+F++ + Q  +S  F
Sbjct: 261 ADVLQAVLTVLFIGLSVLLLIEGIREGKVQRDKVIAMLIIFAFNVLFWMFFEQAGSSFTF 320

Query: 318 FAINNVEHHIFGFDVAPEQFQALNPFWIMIASPILAATYGKLGD-KLAMPFKFAFGMALC 376
            A N V      +      FQ++N   I+  +P++A  + K G    ++P KF  G+   
Sbjct: 321 LADNIVNRTFGNWTFPTAWFQSVNSIAIIALAPVIAWIWVKSGRFNPSIPRKFGLGLIFN 380

Query: 377 ALSFLVLSWG-TLFANEQGIISSNWLIASYAFQSIGELLVSGLGLAMVAQLVPQRMMGFA 435
            L+FL+L +  +   ++ G I    L   Y  QS+GEL +S +GL+MV +L P R++GF 
Sbjct: 381 GLAFLLLMFALSSLVSDAGKIPFWTLFMVYVIQSVGELCLSPIGLSMVTKLAPVRLVGFG 440

Query: 436 MGMWFLTSASAAVIAGWVASLTSTPANVSGATESLHIYGEVFAQIGYVTAGIAIVTFMIA 495
           MG WFL++     ++G  A   S      G + S  + G  F     + AG  +  F++A
Sbjct: 441 MGGWFLSTGIGNNLSGIFAGHVS---GSEGMSVSSALGGYTFGFWALLGAGALL--FLVA 495

Query: 496 PKLTRICRG 504
           P + ++  G
Sbjct: 496 PLINKLMHG 504