Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., Oligopeptide transporter from Xanthomonas campestris pv. campestris strain 8004

 Score =  101 bits (252), Expect = 7e-26
 Identities = 117/502 (23%), Positives = 202/502 (40%), Gaps = 52/502 (10%)

Query: 31  PNAFYLIFSIEFWERFGFYGMQAILTVYMVKIMGMDE--------SASFVLFGAFSALVY 82
           P     I   E  ERF FYGM+ IL  +++  + + E         A  +L  +F   V+
Sbjct: 115 PRQIPFIIGNEACERFSFYGMRNILVQFLITSLLLQEVGAPERDAEAKHILH-SFMIGVF 173

Query: 83  GFVAIGGWIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGN 142
            F  +GGW+ D+  G    I   +++   G+  L L          +  ++ +G I  G 
Sbjct: 174 FFPLLGGWLADRFFGKYTTIIWFSLIYCAGHACLALFEDSR-----SGFFVGLGLIAFGA 228

Query: 143 GLFKANPSSLLAKIYPE-NDPRLDGAFTMYYMAINLGSFFSMIITPLVAIKMGYGMAFGV 201
           G  K   +S +   + + N  R    F  +Y  IN GS F+ ++ PL    +G   AFG+
Sbjct: 229 GGIKPLVASFMGDQFDQSNKHRAKVVFDAFYWIINFGSLFASLLIPLALKHLGPSWAFGI 288

Query: 202 SAVGLAI-TVVNFLFCLRMLKGTGSPAD---LMPVNKMYLVLVAVG-----------SII 246
             + + I T V +L   R ++    P D      V +  L+  A G           S++
Sbjct: 289 PGILMFIATAVFWLGRKRYVRVPLPPKDPHGFGAVVRSALLAHAPGQGRPGLALAAISVL 348

Query: 247 ASLVCSYLLQNLTLAHGILVVAGLFILGCYFKEAFSM---------SGIERAKMLVAFIL 297
            +L C  L + L L   + +   L + G      + +         + ++  + L+  ++
Sbjct: 349 LALACLGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERARGTHPDAAVDGVRALLRVLV 408

Query: 298 MLQGVVFFVLYFQMPTSLNFFAINNVEHHIFGFDVAPEQFQALNPFWIMIASP----ILA 353
           +   V  F   F    S   + +   E  +  +  A  Q QALNP  +M+  P    +L 
Sbjct: 409 IFALVTPFFSLFDQKAST--WVLQGREMRMPAWFTA-SQMQALNPLLVMLLIPFNNLVLY 465

Query: 354 ATYGKLGDKLAMPFKFAFGMALCALSFLVLSWGTLFANEQGIISSNWLIASYAFQSIGEL 413
               +LG +     +   G+A   ++++ +    +  +    +   W I  YA  + GE+
Sbjct: 466 PLLRRLGWEPTSLRRMTSGIAFSGVAWIAVGAIQVAMDGGEPMHIAWQILPYALLTFGEV 525

Query: 414 LVSGLGLAMVAQLVPQRMMGFAMGMWFLTSASAAVIAGWVASLTSTPANVSGATESLHIY 473
           LVS  G+       P  M G  M  W+LT+    +   WV  L S  A V  AT + HI 
Sbjct: 526 LVSATGIEFAYSQAPPSMKGVVMSFWYLTTTVGNL---WV--LLSNVA-VRNATVTSHIA 579

Query: 474 GEVFAQIGYVTAGIAIVTFMIA 495
               ++  ++    A   F+ A
Sbjct: 580 DTGLSEAAFLMFFFAAFAFLAA 601