Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., proton/peptide symporter family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  131 bits (329), Expect = 7e-35
 Identities = 118/445 (26%), Positives = 191/445 (42%), Gaps = 41/445 (9%)

Query: 31  PNAFYLIFSIEFWERFGFYGMQAILTVYMVKIMGMD------ESASFVLFGAFSALVYGF 84
           P     I + E  ERF FYGM+ ILT +++  + +          +  +F +F   VY F
Sbjct: 9   PKQIPYIIASEACERFSFYGMRNILTPFLMTALLLSVPEHLRAGEAKDVFHSFVIGVYFF 68

Query: 85  VAIGGWIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGNGL 144
             +GGWIGD++ G    I   +++  VG+  L +          T  Y  +  I +G+G 
Sbjct: 69  PLLGGWIGDRLFGKYNTILWLSLLYCVGHAFLAIFEDSK-----TGFYTGLFLIALGSGG 123

Query: 145 FKANPSSLLAKIYPENDPRL-DGAFTMYYMAINLGSFFSMIITPLVAIKMGYGMAFGVSA 203
            K   SS +   + +++  L   AF M+Y  IN GSFF+ +  PL+    G  +AFG+  
Sbjct: 124 IKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKHFGAAVAFGIPG 183

Query: 204 VGLAITVVNFLF----CLRMLKGTGSPADLMPV----------NKMYLVLVAVGSIIASL 249
           V + I  V F       + M     +P   +PV          N+  L L  +G+++A +
Sbjct: 184 VLMFIATVFFWAGRHRYVHMPPEPKNPNGFLPVIKTALLSPGANRFGLALALMGTVLAVI 243

Query: 250 VCSY-----LLQNLTLAHGIL---VVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQG 301
              +     L+ +L LA  +L   V +G  +     +       +E  + ++  +++   
Sbjct: 244 ALGFMPSLGLVTSLCLALVLLMGFVGSGASMQLDRARARHGDEAVEGVRAVMRILVLFAL 303

Query: 302 VVFFVLYFQMPTSLNFFAINNVEHHIFGFDVAPEQFQALNPFWIMIASP----ILAATYG 357
           V  F   F    S      N +    +     P   QALNP  +MI  P    +L  T  
Sbjct: 304 VTPFWSLFDQKASTWILQANEMTKPEW---FEPAMMQALNPLLVMILIPFNNFVLYPTLE 360

Query: 358 KLGDKLAMPFKFAFGMALCALSFLVLSWGTLFANEQGIISSNWLIASYAFQSIGELLVSG 417
           + G +L    K A G+A   LS++V+    L  +    +S  W +  YA  + GE+LVS 
Sbjct: 361 RWGFRLTALGKMASGIAFSGLSWVVIGSIQLMMDGGSAVSIVWQVLPYALLTFGEVLVSA 420

Query: 418 LGLAMVAQLVPQRMMGFAMGMWFLT 442
            GL       P+ M G  M  W L+
Sbjct: 421 TGLEFAYSQAPKTMKGTIMSFWTLS 445