Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., amino acid/peptide transporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  214 bits (546), Expect = 4e-60
 Identities = 144/482 (29%), Positives = 240/482 (49%), Gaps = 53/482 (10%)

Query: 31  PNAFYLIFSIEFWERFGFYGMQAILTVYMVKI--------MGMDESASFVLFGAFSALVY 82
           P   +L+F+ E WERF +Y M+AIL +Y+V          +G  ++ +  L+G F+ LVY
Sbjct: 13  PKGLFLLFTTELWERFSYYAMRAILVLYLVDRVQSEGGHGLGWSQADAISLYGTFTGLVY 72

Query: 83  GFVAIGGWIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGN 142
               +GGW+ D  +G ++AI +G  +M  G  +LG   A    +   + Y+ +G + +GN
Sbjct: 73  LTPLLGGWLADNFLGQRKAIMIGGTLMAAGQFILGTPHAWVQGMETEVFYLGLGVLILGN 132

Query: 143 GLFKANPSSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLV--AIKMGYGMAFG 200
           GLFK N S+++  +Y E D R DGAFT++YM IN+G+F S II   V  A    +   F 
Sbjct: 133 GLFKPNISTMVGDLYAEGDHRRDGAFTIFYMGINVGAFLSGIIVGSVVSAYDGNFQAGFI 192

Query: 201 VSAVGLAIT-VVNFLFCLRMLKGTGSPADLMPVNKMYLVLVAVGSIIASLVCSYLLQNLT 259
            + +G+ ++ ++ FLF  ++L   G+    +P  K                   L +   
Sbjct: 193 CAGIGMVLSLIIQFLFAQKLLGNIGT----VPAAK-------------------LEKQKD 229

Query: 260 LAHGILVVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQGVVFFVLYFQMPTSLNFFA 319
            A G +                 ++ +ER ++ V  ++ L  +VF+  + Q    +N F 
Sbjct: 230 EARGQV-------------RKEPLTKVERDRIKVIMVMGLFTIVFWAGFEQAGGLMNLFT 276

Query: 320 INNVEHHIFGFDVAPEQFQALNPFWIMIASPILAATYGKLGDKLA-MPFKFAFGMALCAL 378
            +  +  I  ++V    FQ+LN  +I+I +P++A+ + +LGD+    P KFA G+ L A+
Sbjct: 277 NDFTDRMIGSWEVPTTWFQSLNAMFIVIFAPVVASIWVRLGDREPNSPVKFALGLVLLAI 336

Query: 379 SFLVLSWGTLFANEQGIISSN--WLIASYAFQSIGELLVSGLGLAMVAQLVPQRMMGFAM 436
            FL +    +         S+  WL+ +Y F ++GEL +S +GL+MV +L P R++   M
Sbjct: 337 GFLFMIGAVVEMGGDPTAKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLAPLRIVSLMM 396

Query: 437 GMWFLTSASAAVIAGWVASLTSTPANVSGATESLHIYGEVFAQIGYVTAGIAIVTFMIAP 496
           G WFL  A+A  I G V S      +     E L     +FA I    A   ++ + +A 
Sbjct: 397 GAWFLFIAAANKIGGVVGSFI---GHGGEKEEQLANAMSIFAGIAITAAISGVILYFMAD 453

Query: 497 KL 498
           KL
Sbjct: 454 KL 455