Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., proton-dependent oligopeptide transporter (POT) family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  345 bits (884), Expect = 3e-99
 Identities = 198/500 (39%), Positives = 291/500 (58%), Gaps = 27/500 (5%)

Query: 20  MLMSNLNIFKQPNAFYLIFSIEFWERFGFYGMQAILTVYMVKIMGMDESASFVLFGAFSA 79
           M   N  + K   +F  +  IE WERFGFYGMQA++  +MV+ +G  +  + +++ A +A
Sbjct: 1   MTTGNTQVSKT-RSFMTVSLIELWERFGFYGMQALIVYFMVQRLGFADERANLVWSACAA 59

Query: 80  LVYGFVAIGGWIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFIT 139
           L+Y   AIGGW+GDKV+GTKR + LGA ++ +GY L+ +     P      ++ A+G I 
Sbjct: 60  LIYVAPAIGGWVGDKVLGTKRTMLLGAGILTLGYALMAV-----PTDNTWFLFSALGVIV 114

Query: 140 VGNGLFKANPSSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLVA--IKMGYG- 196
           VGNGLFK N  +L+ KIY  +D ++D AFT+YYMA+N+GS FSM++TP +   +   YG 
Sbjct: 115 VGNGLFKPNAGNLVRKIYDGDDSKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNANYGD 174

Query: 197 -----MAFGVSAVGLAITVVNFLFCLRMLKGTGSPADLMPVNKMYLVLVAVGSIIASLVC 251
                 AF V  VGL + + N++     L   GS  DL+PV+K  L  V   S++A +V 
Sbjct: 175 GFGWHAAFAVCFVGLIVGIGNYMMMRHTLDNYGSEPDLLPVDKRKLAAVLGASLLAVVVS 234

Query: 252 SYLLQNLTLAHGILVVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQGVVFFVLYFQM 311
           + +L+   +A   +  AGL +LG +     +    ERA +L A +L LQ V FF+ Y QM
Sbjct: 235 AVILEFEDIARVFVYGAGLVVLGIFIHLIRTSEESERAGLLAALVLTLQSVFFFIFYQQM 294

Query: 312 PTSLNFFAINNVE-------HHIFGFDVAPEQFQALNPFWIMIASPILAATY---GKLGD 361
            TSL  FA+ NV+        H++ +  +P QFQALNP WIM+ SPILA  Y   GK   
Sbjct: 295 STSLALFALRNVDWDFVVMGQHLWTW--SPAQFQALNPIWIMVLSPILAWAYAWGGKHNK 352

Query: 362 KLAMPFKFAFGMALCALSFLVLSWGTLFANEQGIISSNWLIASYAFQSIGELLVSGLGLA 421
            +++  KFA G A+ A  F + S    FA   G  SS  +I  Y   S+GELLVSGLGLA
Sbjct: 353 DISIAAKFALGFAVVAAGFFIYSVAGEFA-VNGKTSSWVMIWGYGAYSLGELLVSGLGLA 411

Query: 422 MVAQLVPQRMMGFAMGMWFLTSASAAVIAGWVASLTSTPANVSGATESLHIYGEVFAQIG 481
           M+A+ VP+RM GF MG +F+ +  +  + G VA+  S P  ++   E+L IY  +F ++G
Sbjct: 412 MIARYVPERMGGFMMGAYFVATGISQYLGGVVANFASVPQGITNPLETLTIYTSLFNKLG 471

Query: 482 YVTAGIAIVTFMIAPKLTRI 501
           +   G  ++   + P + R+
Sbjct: 472 FAALGCTLIALAVLPLMRRL 491