Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 573 a.a., major facilitator transporter (RefSeq) from Shewanella loihica PV-4

 Score = 55.1 bits (131), Expect = 7e-12
 Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 15/193 (7%)

Query: 31  PNAFYLIFSIEFWERFGFYGMQAILTVYMVKI-----MGMDESASFVLFGAFSALVYGFV 85
           P+ FY+  ++E +ER  +YG   + ++YM        +G  E    +L G     +Y F 
Sbjct: 10  PSTFYVANTMEIFERLAWYGFFTLSSLYMTSPAHQGGLGFSEQERGLLQGMIPFFLYLFP 69

Query: 86  AIGGWIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGNGLF 145
            + G + D+  G ++   +   +M   Y LLG  ++       +  +IA   + +G   F
Sbjct: 70  VLTGALADR-YGYRKMFLIAYAIMCPSYFLLGQVSSF------SGFFIAFMGVAIGAACF 122

Query: 146 KANPSSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLVAIKMGYGMAFGVSAVG 205
           K   +  +A+     +  L   F ++YM +N+G F    I   V   + +   F +SA+ 
Sbjct: 123 KPVVTGTVARTTDHTNRGL--GFGIFYMMVNVGGFLGPFIAGYVR-AISWDWVFIMSAIW 179

Query: 206 LAITVVNFLFCLR 218
           + I  +   F  R
Sbjct: 180 IGINFIPATFFYR 192



 Score = 34.7 bits (78), Expect = 1e-05
 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 15/123 (12%)

Query: 332 VAPEQFQALNPFWIMIASPI---LAATYGKLGDKLAMPFKFAFGMALCALSFLVLSWGTL 388
           V PE    LN   I++   +   +A  +  L   +A     A G AL  L+  +L  G +
Sbjct: 404 VNPEYLIGLNFLSIVLMQVMVSRIAERFSPLPVLVAGTLILALGTALGGLAHGILMGGAM 463

Query: 389 FANEQGIISSNWLIASYAFQSIGELLVSGLGLAMVAQLVPQRMMGFAMGMWFLTSASAAV 448
                       ++ S    SIGE++ S      VA   PQ      MG +F++SA   +
Sbjct: 464 ------------VLTSILVFSIGEMVASPKSQEYVASFAPQDKKAMFMGYYFVSSAIGFL 511

Query: 449 IAG 451
           +AG
Sbjct: 512 LAG 514