Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., amino acid/peptide transporter (RefSeq) from Shewanella loihica PV-4

 Score =  212 bits (540), Expect = 2e-59
 Identities = 145/491 (29%), Positives = 234/491 (47%), Gaps = 53/491 (10%)

Query: 31  PNAFYLIFSIEFWERFGFYGMQAILTVYMVKI--------MGMDESASFVLFGAFSALVY 82
           P   +L+F+ E WERF +Y M+AIL +Y+V          +G  ++ +  L+G F+ LVY
Sbjct: 14  PKGLFLLFTTELWERFSYYAMRAILVLYLVDAVQSQGGHGLGWTQADALNLYGTFTGLVY 73

Query: 83  GFVAIGGWIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGN 142
               IGGW+ D  +G ++AI +G  +M  G  +LG   A    +   + Y+ +G + +GN
Sbjct: 74  LTPLIGGWLADTFLGQRKAIMIGGALMAAGQFILGTPHAWVQGMETEVFYVGLGVLILGN 133

Query: 143 GLFKANPSSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLVAIKMGYGMAFGVS 202
           GLFK N S+++  +Y E D R DGAFT++YM IN+G+F S II   V          G  
Sbjct: 134 GLFKPNISTMVGDLYEEGDHRRDGAFTIFYMGINVGAFLSGIIVGSVVAYFDGNFQAGFI 193

Query: 203 AVGLAI---TVVNFLFCLRMLKGTGSPADLMPVNKMYLVLVAVGSIIASLVCSYLLQNLT 259
             G+ +    ++ FLF  ++L   G                         V +  L+   
Sbjct: 194 CAGIGMILSLIIQFLFAQKLLGDIGR------------------------VPAAQLEKQR 229

Query: 260 LAHGILVVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQGVVFFVLYFQMPTSLNFFA 319
            A            G   KE   ++ +ER ++ V  ++ L  ++F+  + Q    +N F 
Sbjct: 230 AAE----------KGEVRKE--PLTKVERDRIKVIMVMGLFTIIFWAGFEQAGGLMNLFT 277

Query: 320 INNVEHHIFGFDVAPEQFQALNPFWIMIASPILAATYGKLGDKLA-MPFKFAFGMALCAL 378
            +  +  I  ++V    FQ+LN  +I+I +P++A+ + +LGD+    P KFA G+ L A 
Sbjct: 278 NDFTDRMIGSWEVPTTWFQSLNAMFIVIFAPVVASIWVRLGDREPNSPVKFALGLVLLAT 337

Query: 379 SFLVLSWGTLFANEQGIISSN--WLIASYAFQSIGELLVSGLGLAMVAQLVPQRMMGFAM 436
            FL +    L         S+  WL+ +Y F ++GEL +S +GL+MV +L P R+    M
Sbjct: 338 GFLFMIGAVLEMGGDANAKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLAPLRIASLMM 397

Query: 437 GMWFLTSASAAVIAGWVASLTSTPANVSGATESLHIYGEVFAQIGYVTAGIAIVTFMIAP 496
           G WFL  A+A  I G + S      +     E L     +FA I    A   ++ + +A 
Sbjct: 398 GAWFLFVAAANKIGGIIGSFI---GHGGAKEEQLANAMSIFAGIAITAALSGVILYFMAD 454

Query: 497 KLTRICRGESE 507
           KL     G  +
Sbjct: 455 KLVDWMHGAED 465