Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., oligopeptide:H+ symporter from Dyella japonica UNC79MFTsu3.2

 Score =  234 bits (597), Expect = 5e-66
 Identities = 153/492 (31%), Positives = 264/492 (53%), Gaps = 31/492 (6%)

Query: 31  PNAFYLIFSIEFWERFGFYGMQAILTVYMVKIM--GMDESASFV--LFGAFSALVYGFVA 86
           P   +++F  EFWERF FYGM+  LT+Y+V     G     +F    +GA+ ALVY    
Sbjct: 21  PRPLWMLFMTEFWERFAFYGMRWALTLYIVAEFFGGSPTGQAFASRTYGAYLALVYAAAV 80

Query: 87  IGGWIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGNGLFK 146
            GG++ DKVIG +R+I +GA+VM  G  ++ L   D  L+G       +  + VGNGLFK
Sbjct: 81  FGGYVADKVIGYQRSILVGAVVMSAGLFMIMLPNQDIFLLG-------LSTVIVGNGLFK 133

Query: 147 ANPSSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLVA-------IKMGYGMAF 199
            N SS++ ++Y   DPR D  FT++YM IN G+  S ++T  +A       ++  Y + F
Sbjct: 134 PNISSMVGQLYGVGDPRRDRGFTLFYMGINAGALVSPLLTGWLASYFTDTPVQQNYKLVF 193

Query: 200 GVSAVGLAITVVNFLFCLRMLKGTGSPADLMPVNKMYLVLVAVGSIIASLVCSYLLQNLT 259
             S +G+ +++V F    R LKG G P      N+M +V V +G +IA  +   ++    
Sbjct: 194 LASGLGMLVSLVWFWIGRRQLKGVGRPLP-DQANRMRVVYVLIGCVIAIPLVYLVMAKAG 252

Query: 260 LAHGILVVAGLFILGCYFK--EAFSMSGIERAKMLVAFILMLQGVVFFVLYFQMPTSLNF 317
                 +++ LF+  C     +      ++R +++   ++ +  V+F++ Y Q  +S NF
Sbjct: 253 AVVLQWLLSILFVGLCVMLMIDGVREGKVQRDRVIAMLVIFVFNVLFWMFYEQAGSSFNF 312

Query: 318 FAINNVEHHIF-GFDVAPEQFQALNPFWIMIASPILAATYGKLGDKL---AMPFKFAFGM 373
            A N V+  +F G++     FQ++ P  +++ +P ++  +G L  +    ++P KF FG+
Sbjct: 313 LAENIVDRKMFGGWEFPVGWFQSVAPLALVLLAPPMSMLWGWLDKRRLEPSIPRKFGFGL 372

Query: 374 ALCALSFLVLSWG-TLFANEQGIISSNWLIASYAFQSIGELLVSGLGLAMVAQLVPQRMM 432
              A++F+VL +  +   + QG+I    L+  Y  Q++GEL +S +GL+MV +L P R++
Sbjct: 373 LGNAVAFVVLMYALSSLVDAQGLIPFWPLVLVYVLQTVGELCLSPIGLSMVTKLAPGRLV 432

Query: 433 GFAMGMWFLTSASAAVIAGWVASLTSTPANVSGATESLHIYGEVFAQIGYVTAGIAIVTF 492
           G AMG WFL++     ++G  A   S     +G T +  + G  F+   ++    A++  
Sbjct: 433 GLAMGGWFLSTGIGNNLSGIFAGHVS---GTTGMTVASALSGFTFS--FWLLGVAAVILL 487

Query: 493 MIAPKLTRICRG 504
           ++AP + R+  G
Sbjct: 488 LVAPLINRLMHG 499