Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., di-/tripeptide transporter from Caulobacter crescentus NA1000

 Score =  158 bits (400), Expect = 5e-43
 Identities = 118/425 (27%), Positives = 193/425 (45%), Gaps = 55/425 (12%)

Query: 130 LIYIAMGFITVGNGLFKANPSSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLV 189
           + + ++  I +G G  K N S+++ ++YP+ DPR D  FT+YY  INLGSF++ I+  L+
Sbjct: 197 IFWFSLSLIILGVGFLKPNISTIVGQLYPQGDPRRDPGFTLYYYGINLGSFWASILCGLL 256

Query: 190 AIKMGYGMAFGVSAVGLAITVVNFLFCLRMLKGTGSPAD--------LMPVNKMYLVLVA 241
            + +G+   FG++ VG+    + F+     L G   P +          P+N+    L  
Sbjct: 257 GVNVGWWAGFGLAGVGMLAGFIVFVLGKPWLDGKAEPPEPKVLKEKVAGPINR---ELAI 313

Query: 242 VGSIIASLVCSYLLQNLTLAHGIL----VVAGLFILGCYFKEAFSMSGIERAKMLVAFIL 297
            G  +  LV  + L       G+     ++A L  +G +     +    ER ++ +A  L
Sbjct: 314 YGLSLVGLVGIFFLVQFNAIVGVALNIGILASLGYIGFFMFTKCAKE--ERERLALAVFL 371

Query: 298 MLQGVVFFVLYFQMPTSLNFFAINNVEHHIF----------------------GFDVA-- 333
           +   VVF+ L+ Q  +SL+ FA  NV+  +                       G D A  
Sbjct: 372 IFGAVVFWTLFEQAGSSLSLFAATNVQLDLVREPLRLFSGAVTLATPDQLAKAGIDAAST 431

Query: 334 --------PEQFQALNPFWIMIASPILAATYGKLGDKLAMP---FKFAFGMALCALSFLV 382
                     Q QALN  WI+I +P+ AA +  LG +   P    KF   +      FL+
Sbjct: 432 FWVDTSFNAPQTQALNAGWILIFAPVFAAVWTFLGARGKDPNPVIKFGLALIQVGAGFLL 491

Query: 383 LSWGTLFANEQGIISSNWLIASYAFQSIGELLVSGLGLAMVAQLVPQRMMGFAMGMWFLT 442
           L WG+ FA+    +   +L+  Y   + GEL +S +GL+ + +L P  ++ F M +WFL 
Sbjct: 492 LQWGSTFADGAFKLPLIFLVLMYMLHTTGELCMSPVGLSQMTKLSPASVVSFMMAVWFLA 551

Query: 443 SASAAVIAGWVASLTSTP---ANVSGATESLHIYGEVFAQIGYVTAGIAIVTFMIAPKLT 499
            A A  + G +A L +T      V     +L    +VF  IG V   I I   +++P L 
Sbjct: 552 VAIAQWVGGKIAGLAATETVGGQVLDPGAALAASLKVFNIIGLVAVAIGIGFLLLSPVLK 611

Query: 500 RICRG 504
           +   G
Sbjct: 612 KWSHG 616



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 85  VAIGGWIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGNGL 144
           VAI  W+G K+ G     T+G  V+  G   L  S     ++G   + I +GF+ +   L
Sbjct: 552 VAIAQWVGGKIAGLAATETVGGQVLDPG-AALAASLKVFNIIGLVAVAIGIGFLLLSPVL 610

Query: 145 FK 146
            K
Sbjct: 611 KK 612