Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., di-tripeptide ABC transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  207 bits (528), Expect = 6e-58
 Identities = 141/507 (27%), Positives = 256/507 (50%), Gaps = 35/507 (6%)

Query: 31  PNAFYLIFSIEFWERFGFYGMQAILTVYMVKIMGMDESASFVLFGAFSALVYGFVAIGGW 90
           P   YLIF+    ERF +YGM+AI  +++ + +  D+ A+  ++G+++ LVY    IGG+
Sbjct: 8   PKGLYLIFATSTAERFSYYGMRAIFILFLTQALLFDKEAAASIYGSYTGLVYLTPLIGGY 67

Query: 91  IGDKVIGTKRAITLGAIVMMVGYVLLGLSTA--DHPLVGPTLIYIAMGFITVGNGLFKAN 148
           I DK  G +R++  GA++M VG  L+ +S +  ++  +   L+Y  +GF+ +GNG FK  
Sbjct: 68  IADKYWGIRRSVFWGAVMMAVGQFLMFMSASSLNNTDLAHWLMYGGLGFMILGNGCFKPT 127

Query: 149 PSSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLV---AIKMGYGMAFGVSAVG 205
            SSL+ ++Y   D RLD A+T++YM +N+GSF + +I   +        +   F  S + 
Sbjct: 128 VSSLVGQLYEPGDKRLDAAYTIFYMGVNVGSFAAPLICGFLGDTGNPQDFKWGFLASGIM 187

Query: 206 LAITVVNFLFCLR--MLKGTGSPADLMP------------------VNKMYLV--LVAVG 243
              TVV F       +   +G P  ++P                  ++K   V  ++ + 
Sbjct: 188 TLFTVVLFETQKNKYLFSPSGEPIGIVPDARREKKEDKAEHISHPKMDKRTKVRNIIIIT 247

Query: 244 SIIASLVC--SYLLQNLTLAHGILVVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQG 301
           ++  +L+   SY   +  ++ GI     +F +        S++ +ER+++ V +I+    
Sbjct: 248 ALTVALIAFFSYAFSDDWISVGIFTACIVFPVLILLDG--SLTKVERSRIFVIYIVAFFV 305

Query: 302 VVFFVLYFQMPTSLNFFAINNVEHHIFGFDVAPEQFQALNPFWIMIASPILAATYGKLGD 361
           + F+  Y Q   SL  FA    +  IFG+++    FQ+ NP +++I + I+   +G L  
Sbjct: 306 IFFWAAYEQAGASLTLFASEQTDRSIFGWEMPASWFQSFNPLFVVILAYIMPGIWGFLNK 365

Query: 362 K---LAMPFKFAFGMALCALSFLVLSWGTLFANEQGIISSNWLIASYAFQSIGELLVSGL 418
           +    A P K A G+ L +L +L + +G   A     +S  WL   Y   ++GE+ +S +
Sbjct: 366 RNMEPASPTKQAIGLLLLSLGYLFICFGVKDAIPGVKVSMIWLTGLYFIHTMGEIALSPI 425

Query: 419 GLAMVAQLVPQRMMGFAMGMWFLTSASAAVIAGWVASLTSTPANVSGATESLHIYGEVFA 478
           GL+MV +L P R     MG+W+L++A+A   AG ++ L      V             F 
Sbjct: 426 GLSMVNKLSPLRFASLMMGIWYLSTATANKFAGMLSGLYPEDGKVKSILGYQIATMYDFF 485

Query: 479 QIGYVTAGIA-IVTFMIAPKLTRICRG 504
            +  + +G+A ++ F+++ KL ++  G
Sbjct: 486 MLFVIMSGVASLILFLLSKKLQKMMHG 512