Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., putative permease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 65.9 bits (159), Expect = 3e-15
 Identities = 106/485 (21%), Positives = 191/485 (39%), Gaps = 77/485 (15%)

Query: 33  AFYLIFSIEFWERFGFYGMQAILTVYMVKIMGMDESASFVLFGAFSALVYGFVAIGGWIG 92
           AF++  ++E +ER  +Y +  +LT+Y+  I+G ++  + ++ G FS  +Y      G   
Sbjct: 15  AFWVSNTVELFERMAYYAVFIVLTIYLSSILGFNDFEASMISGLFSGGLYLLPIFSGAYA 74

Query: 93  DKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLI----YIAMGFITVGNGLFKAN 148
           DK IG ++++ +   ++ +GY+ LG        V PTL+     ++ G  T  NGL    
Sbjct: 75  DK-IGFRKSMIIAFSLLSIGYLGLG--------VFPTLLEAAGLVSYGATTRFNGL---- 121

Query: 149 PSSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLVAIK-------MGYGMAFGV 201
                    P++  R      ++ + I  GSF   II+  VA +        GY + + +
Sbjct: 122 ---------PDSSSRWIIVPILFILMIG-GSFIKSIISASVAKETTEATRARGYSIFYMM 171

Query: 202 SAVGLAITVVNFLFCLRMLKGTGSPADLMPVNKMYLVLVAVGSIIASLVCSYLLQNLTLA 261
             VG A T    +  LR + G  +         +Y+   +    + +L+   LL   T  
Sbjct: 172 VNVG-AFTGKTIIDPLRNVIGEQA--------YIYINYFSGAMTVIALLAVILLYKSTHT 222

Query: 262 HGILVVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQGVVFFVLYFQMPTSLNFFAIN 321
            G               E  S+  I +  M +     L  ++  V  F M     +  + 
Sbjct: 223 AG---------------EGKSLREIGQGFMRIMTNWRLLILILIVTGFWMVQQQLYATMP 267

Query: 322 NVEHHIFGFDVAPEQFQALNPFWIMIASPILAATYGKLGDKLAMPFKFAFGMALCALSFL 381
                + G    P     +NPF ++     +     K     +M      GM L  +S L
Sbjct: 268 KYVIRLAGETAKPGWIANVNPFVVVCCVSFITRLMAKRSAITSM----NVGMFLIPVSAL 323

Query: 382 VLSWGTLFANEQGIISSN---WLIASYAFQSIGELLVSGLGLAMVAQLVPQRMMGFAMGM 438
           +++ G +  N+     SN    ++A    Q++ E  +S   L   +   P+   G  +G 
Sbjct: 324 LMACGNILGNDIISGMSNITLMMVAGIVVQALAECFISPRYLEYFSLQAPKGEEGMYLGF 383

Query: 439 WFLTSASAAVIAGWVA-----------SLTSTPANVSGATESLHIYGEVFAQIGYVTAGI 487
             L S  +++    +A           +L  T A    A+ + H     FA IG + A I
Sbjct: 384 SHLHSFLSSIFGFGLAGILLTKYCPDPALFETRAAWEAASANAHYIWYYFAAIGLI-AAI 442

Query: 488 AIVTF 492
           A++ F
Sbjct: 443 ALLLF 447