Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., amino acid/peptide transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  209 bits (532), Expect = 2e-58
 Identities = 147/502 (29%), Positives = 246/502 (49%), Gaps = 62/502 (12%)

Query: 31  PNAFYLIFSIEFWERFGFYGMQAILTVYMV-KI-------MGMDESASFVLFGAFSALVY 82
           P   +L+F+ E WERF +Y M+AIL +Y+V K+       +G  ++ +  L+G F+ LVY
Sbjct: 14  PKGLFLLFTTELWERFSYYAMRAILVLYLVDKVQSEGGHGLGWTQADAISLYGTFTGLVY 73

Query: 83  GFVAIGGWIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGN 142
               IGGW+ D  +G +RAI +G  +M  G  +LG   A  P +   + Y+ +G + +GN
Sbjct: 74  LTPLIGGWLADTFLGQRRAIMIGGTLMAAGQFILGTPHAWVPGMETEVFYVGLGTLILGN 133

Query: 143 GLFKANPSSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMII--TPLVAIKMGYGMAFG 200
           GLFK N S+++  +Y E D R DGAFT++YM IN+G+F S II  + + A    +   F 
Sbjct: 134 GLFKPNISTMVGDLYEEGDHRRDGAFTIFYMGINVGAFLSGIIVGSVVAAYDGNFQAGFI 193

Query: 201 VSAVGLAIT-VVNFLFCLRMLKGTG-SPADLMPVNKMYLVLVAVGSIIASLVCSYLLQNL 258
            + +G+ ++ ++  +F  ++L   G +PA  +   K        G +             
Sbjct: 194 CAGIGMILSLIIQLVFAQKLLGDIGRTPAAKLEKQK----AAEKGEV------------- 236

Query: 259 TLAHGILVVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQGVVFFVLYFQMPTSLNFF 318
                                   ++ +ER ++ V  ++ L  ++F+  + Q    +N F
Sbjct: 237 --------------------RKEPLTKVERDRIKVIMVMGLFTIIFWAGFEQAGGLMNLF 276

Query: 319 AINNVEHHIFGFDVAPEQFQALNPFWIMIASPILAATYGKLG-DKLAMPFKFAFGMALCA 377
             +  +  I  ++V    FQ+LN  +I+I +P++A+ + +LG ++   P KFA G+ L A
Sbjct: 277 TNDFTDRMIGTWEVPTTWFQSLNAMFIVIFAPVVASIWVRLGKNEPNSPVKFALGLVLLA 336

Query: 378 LSFLVLSWGTLFANEQGIISSN--WLIASYAFQSIGELLVSGLGLAMVAQLVPQRMMGFA 435
           + FL +    +         S+  WL+ +Y F ++GEL +S +GL+MV +L P R+    
Sbjct: 337 VGFLFMIGAVVEMGGDASAKSSMWWLVGAYFFHTMGELCLSPIGLSMVTKLAPLRIASLM 396

Query: 436 MGMWFLTSASAAVIAGWVASLTSTPANVSGATESLHIYGEVFAQIGYVTAGIAIVTFMIA 495
           MG WFL  A+A  I G V S      +     E L     +F+ I    A   +V + +A
Sbjct: 397 MGSWFLFVAAANKIGGVVGSFI---GHGGEKEEQLANAMAIFSGIAITAALSGVVLYFMA 453

Query: 496 PKLTRICRG-------ESEPLE 510
            KL     G       E+E LE
Sbjct: 454 DKLVDWMHGAESKHHNEAEALE 475