Pairwise Alignments

Query, 304 a.a., epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  268 bits (685), Expect = 1e-76
 Identities = 149/303 (49%), Positives = 194/303 (64%), Gaps = 8/303 (2%)

Query: 1   MRILITGGTGFVGFELIK-LLSSHELLVLTRDLTKAAQRFAHIPSQNLQLLRSLDELSDF 59
           M+ILITG +GF+G +L+  L + HELL+LTR      Q    +     Q L SLDE+ D 
Sbjct: 1   MKILITGASGFIGQQLVAHLANQHELLLLTRHPGSIRQ----LLGPQHQYLSSLDEIDDL 56

Query: 60  NGIDAIINLAGEPIADKRWSKSQKQRIARSRLDITEQLVEKIHASAHPPAVFLSGSAVGF 119
           N I+A+INLAGEPI  KRWS  QKQ I  SR +IT +L + I  S +PP V +SGSA+GF
Sbjct: 57  NHINAVINLAGEPIVAKRWSAQQKQHICDSRWNITARLSQLILQSNNPPQVMISGSAIGF 116

Query: 120 YGDQQQHAFDESLQVRSDHFSHQVCQQWEQRALKAQSEQTRVCLLRTGIVLAPEGGALKK 179
           YG Q     DE     S+ FSH +C++WE+ ALKA S+ TRVC+LRTGIVL   GGAL K
Sbjct: 117 YGRQGAIPIDEHAVPHSE-FSHDICKEWERLALKATSK-TRVCILRTGIVLG-HGGALAK 173

Query: 180 MLPPYRLGLGGPIGDGQQYMPWIHMQDMVRAILFLLETEHAQGPYNLCAPHPVTNAEFSL 239
           MLPP++LG+GGPIG G+Q M WIHM DMV  I FLL  +   G +N  AP+PV+N EFS 
Sbjct: 174 MLPPFKLGIGGPIGHGRQGMSWIHMHDMVALIEFLLCHQECHGIFNATAPYPVSNTEFSK 233

Query: 240 TLATTLKRPHLFKTPQWLIKMLLGEASELLLDSIRAKPKKLTDLGFQFHYSRIDRAFNQL 299
           TL   L RP    TP  ++++ +GE ++LL +     PK   D GF F + +++ A   L
Sbjct: 234 TLGKVLNRPAFMTTPVPVLRLAMGEMADLLTEGQFVLPKHALDAGFTFRFEQLEPALKDL 293

Query: 300 LTA 302
           L +
Sbjct: 294 LAS 296