Pairwise Alignments

Query, 306 a.a., co-chaperone YbbN from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., thioredoxin domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  182 bits (461), Expect = 1e-50
 Identities = 109/279 (39%), Positives = 155/279 (55%), Gaps = 3/279 (1%)

Query: 28  IIDVSQHNFHQVLQHSTLSPVLFYFWAPISHESAELLPAIEQLTERYQGAFVLARLNCQE 87
           ++D+++ N  QV+  S    V+  FW+  S ES +L+  + Q+    QG F+LA++NC +
Sbjct: 4   VLDLTKENIQQVVDASMQQVVVMTFWSQQSPESLQLMQMLTQIAA--QGRFLLAKVNCDQ 61

Query: 88  EQGIAAQFGIQAIPTIALFIEGKPVDGLGGPQPIEAVEEMLKRHLPSDEERLMYQGFELA 147
           E  IA  F IQ++PT  +  EGKPVDG  G Q    +E +L +HLP   +  + Q     
Sbjct: 62  EMEIANYFQIQSLPTTLVLKEGKPVDGFAGLQEAAQIEALLDQHLPKAWQVALNQAKAQL 121

Query: 148 EQEQFSEALSLLSTLSDEWRNKGEVKLTLARCYLETGAVEAAQTELANMPLEYQQGEYKT 207
            +     AL LL     E +   EV L  A   L    +  A+  L  + L  Q   Y++
Sbjct: 122 AEGDAEGALPLLKQAYQECQT-AEVSLVYADALLAVADINQAKVLLDGVGLADQDAYYQS 180

Query: 208 LIARLELHQQAANSPEIIALEQEWNSDPQNPNIAIELAKQYHHVKRDEEALSLLWSWLSK 267
           L A+L L   AA++PEI +L  +   DP +    + LAK  H  KRDEEAL  L+  L  
Sbjct: 181 LKAKLSLALDAADTPEIRSLLDDVEQDPSDYAKLLSLAKALHGAKRDEEALERLYLVLKT 240

Query: 268 NLNTLDGEMKKTFMDILTALGQGHPLANQYRKKLYSLLY 306
           +L    GE+K+ FM+ILTALGQGH +ANQYR+KLY+LLY
Sbjct: 241 DLQAQQGEIKQLFMEILTALGQGHAVANQYRRKLYTLLY 279