Pairwise Alignments

Query, 306 a.a., paraslipin from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., HflC protein (RefSeq) from Shewanella loihica PV-4

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 57/244 (23%), Positives = 125/244 (51%), Gaps = 14/244 (5%)

Query: 9   IAVLVLAVVIFIS-SAVKTVPQGNNWTVERFGRY------TQTLKPGLNLIIPFIDRVGH 61
           ++V++ A+++ +  S++  V +G    V RFG+       T+  KPGL++ +P ID++ +
Sbjct: 4   LSVIIAAILVAMGLSSLMVVNEGERAIVSRFGKIIKDEGVTRIYKPGLHIKLPVIDKIKY 63

Query: 62  KINMMEQVLDIPAQEVISKDNANVVIDAVCFVQVIDAAKAAYEVS-----QLQHAIRNLT 116
            ++   Q +D  A   ++ +  ++++D+    ++ D  K     +     Q +  ++   
Sbjct: 64  -LDSRIQTMDGAADRFVTSEKKDLMVDSYVKWRIKDHEKYYLATNGGNKVQAESLLQRKI 122

Query: 117 LTNMRTVLGSMELDEMLS-QRDMINTKLLSIVDHATSPWGVKVTRIEIKDVQPPADLTAA 175
             ++RT  G   + +++S  RD +    L     +    G++V  + +K +  PA+++++
Sbjct: 123 NNDLRTEFGRRTIKDIVSGSRDELQQDALRNASDSAQDLGIEVVDVRVKQINLPANVSSS 182

Query: 176 MNAQMKAERNKRAEVLEAEGVRQAQILRAEGQKQSEILKAEGEKQAAILQAEARERAAEA 235
           +  +M+AER   A+   A+G  Q++I+RA+      I  AE E++A  ++ E    AA+ 
Sbjct: 183 IYQRMRAERTAVAKEHRAQGKEQSEIIRAKTDASVTIQIAEAERKALQVRGEGDAIAAKI 242

Query: 236 EAKA 239
            A A
Sbjct: 243 YADA 246