Pairwise Alignments

Query, 306 a.a., paraslipin from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., hflC protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 60/248 (24%), Positives = 122/248 (49%), Gaps = 18/248 (7%)

Query: 9   IAVLVLAVVIFIS-SAVKTVPQGNNWTVERFG----------RYTQTLKPGLNLIIPFID 57
           ++++++AV++ I  S+V  V +G    V RFG          + T+   PGL+  +P ID
Sbjct: 4   LSIVLIAVILGIGLSSVMVVNEGERAIVARFGEIVKDNVDGKQVTRVFSPGLHFKVPVID 63

Query: 58  RVGHKINMMEQVLDIPAQEVISKDNANVVIDAVCFVQVIDAAKAAYEV-----SQLQHAI 112
           +V   ++   Q LD  A   ++ +  ++++D+    ++ D  K          S  +  +
Sbjct: 64  KV-KLLDARIQTLDGAADRFVTSEKKDLMVDSYVKWRIFDFEKYYLSTNGGIKSNAETLL 122

Query: 113 RNLTLTNMRTVLGSMELDEMLS-QRDMINTKLLSIVDHATSPWGVKVTRIEIKDVQPPAD 171
           +     ++RT  G   + E++S QRD +    L+    +    G++V  + +K +  PA+
Sbjct: 123 QRKINNDLRTEFGRRTIKEIVSGQRDELQNNALANAAESAKDLGIEVVDVRVKQINLPAN 182

Query: 172 LTAAMNAQMKAERNKRAEVLEAEGVRQAQILRAEGQKQSEILKAEGEKQAAILQAEARER 231
           ++ ++  +M+AER   A+   A+G  Q++I+RA       +  AE E++A  ++ E    
Sbjct: 183 VSNSIYQRMRAERQAVAKEHRAQGKEQSEIIRATIDANVTVKIAEAERKALTIRGEGDAL 242

Query: 232 AAEAEAKA 239
           AA+  + A
Sbjct: 243 AAKIYSDA 250