Pairwise Alignments

Query, 349 a.a., chitoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., outer membrane porin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 50.4 bits (119), Expect = 6e-11
 Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 25/202 (12%)

Query: 4   MFKRTLLGAAVAMAS-TGAFAASETGAIGVLSDFNVQAYGVAAISAFYQEDSNGYDYENE 62
           +F +TLL +A+A A+   A+AA      G L+        V A S     D+      N 
Sbjct: 3   VFCKTLLASALASATLASAYAAEPLTVYGKLN--------VTAQSNDENGDATTTIQSNA 54

Query: 63  SRIGFRASKDMFDNVNVFMQIESGYVGEDGKGST--LGARDTFLGLQGDWGKVRFGRMLT 120
           SR G +   ++  +++ F  +E  Y  + G  S+    AR+ F+GL+GD+G    GR  T
Sbjct: 55  SRFGVKGDFELSSSLSAFYTVE--YQVDTGAASSDNFTARNQFVGLKGDFGSFSVGRNDT 112

Query: 121 PLYEIVDWPYSNPGLGRVFDWGGDVAGHYD---RKGDIARYDSPAFGGLTFNIS--AGRG 175
            L        S   + +  D  GD+   +    R    A Y +P+FG   F ++  A   
Sbjct: 113 LL------KISQGDVDQFNDLSGDLGKLFKGEVRAAQTATYLTPSFGDFVFGVTYVAEGN 166

Query: 176 DVGTK-SSNHFGAAAHYNAADI 196
           DV ++ + + F  AA Y  A +
Sbjct: 167 DVKSQFAQDGFSVAAMYGDAKL 188