Pairwise Alignments

Query, 349 a.a., chitoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., porin from Burkholderia phytofirmans PsJN

 Score = 57.0 bits (136), Expect = 8e-13
 Identities = 75/313 (23%), Positives = 122/313 (38%), Gaps = 50/313 (15%)

Query: 1   MDKMFKRTLLGAAVAMASTGAFAASETGAIGVLSDFNVQAYGVAAISAFYQEDSN--GYD 58
           M+K+   T  GA  A A++ AFA S           +V  YG+   +  YQ ++   G D
Sbjct: 1   MNKILIFTAAGALFAAAASSAFAQS-----------SVTLYGIVDEAIRYQTNAGPGGKD 49

Query: 59  Y-------ENESRIGFRASKDMFDNVNVFMQIESGYVGEDGK---GSTLGARDTFLGLQG 108
                   E  SR G R S+D+ D  +   ++E+G+   +G+     TL +R  F+GL  
Sbjct: 50  QVAMTSGPETHSRWGLRGSEDLGDGWSAIFRLENGFEAFNGQLHVPGTLFSRQAFVGLSN 109

Query: 109 -DWGKVRFGRMLTPLYEIVDWPYSNPGLGRVF--DWGGDVAGHYDRKGDIARYDSPAFGG 165
             WG + FGR   P Y+ +   +    +G  +   W  +  G Y    +  +Y   +F G
Sbjct: 110 KTWGSLTFGRQYAPAYDTLGDIFDPLTVGNYWQNSWMYNGIGPYLEINNSVKYKG-SFYG 168

Query: 166 LTFNISAGRGDVGTKSSNHFGAAAHYNAADIVTFHVGYENNSNFKYDYKTKDTAGKDVDN 225
           L  +   G G+     +   G  A Y A ++   +     N+ F+         G  V  
Sbjct: 169 LDVDALYGFGN----QAGAVGLGATY-AVELTYTYGPAMLNAGFQQVSVPTSATGSSVGT 223

Query: 226 T-----------FLTDATAYIVGFELPLPAGF-------GLAGAYKYTEGASKTVKGQEG 267
           +           FL  + A+ V  ++ L AG+       GL  +Y    GA     G   
Sbjct: 224 SVGSPINGAKTNFLHISGAFQVTHDIRLLAGWLRGQDRTGLTDSYMQQSGAPTLKGGSPN 283

Query: 268 EQGQYSLIGQYWN 280
                  +G  W+
Sbjct: 284 RIDDTYYVGANWH 296