Pairwise Alignments

Query, 349 a.a., chitoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., porin from Burkholderia phytofirmans PsJN

 Score = 57.4 bits (137), Expect = 6e-13
 Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)

Query: 14  VAMASTGAFAASETGAIGVLSDFNVQAYGVAAISAFYQE---DSNGYDYENES------- 63
           +A+++      S TG     S  +V  YG+   S  Y     D+NG +            
Sbjct: 4   IALSTLSLALLSATGVAHAQS--SVTLYGLIDESIQYAHNTVDTNGKNSNQVGLVGGNLQ 61

Query: 64  --RIGFRASKDMFDNVNVFMQIESGY---VGEDGKGSTLGARDTFLGLQGD-WGKVRFGR 117
             R G + ++D+   +    Q+E+G+    G+ G+G  +  R  ++GL GD WG    GR
Sbjct: 62  GPRFGLKGTEDLGGGLKAIFQLENGFDVNTGKLGQGGRMFGRQAYVGLTGDQWGTFTLGR 121

Query: 118 MLTPLYEIVDWPYSNPGLGRVFDWGGDVAG--HYDRKGDIARYDSPAFGGLTFNISAGRG 175
              PL ++V    ++   G  F   GDV    +  R     +Y SP + G  F      G
Sbjct: 122 QYDPLVDLVQPLTADNYFGSTFTTPGDVDNNDNSSRTNSAIKYTSPVWSGFQFEGMYALG 181

Query: 176 DV--GTKSSNHFGAAAHY 191
            V   T S   +  AA Y
Sbjct: 182 GVAGATGSGQSWSGAATY 199



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 5/72 (6%)

Query: 218 TAGKDVDNTFLTDATAYIVGFELPLPAGFGLAGAYKYTEGASKTVKGQEGEQGQYSLIGQ 277
           T   DVDN   +  T   + +  P+ +GF   G Y     A   V G  G    +S    
Sbjct: 144 TTPGDVDNNDNSSRTNSAIKYTSPVWSGFQFEGMY-----ALGGVAGATGSGQSWSGAAT 198

Query: 278 YWNGPWGFKVGY 289
           Y  GP+    GY
Sbjct: 199 YATGPFSVAAGY 210