Pairwise Alignments

Query, 349 a.a., chitoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., porin from Burkholderia phytofirmans PsJN

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 79/275 (28%), Positives = 114/275 (41%), Gaps = 52/275 (18%)

Query: 14  VAMASTGAFAASETGAIGVL-SDFNVQAYGVAAISAFYQEDSNGYDYEN-------ESRI 65
           +A+A+ GAFA       GV  +  +V  YG+         +S G    N        SR 
Sbjct: 6   LALAALGAFA-------GVAHAQSSVTLYGIIDEGFNINTNSGGKHLYNLSSGVLQGSRF 58

Query: 66  GFRASKDMFDNVNVFMQIESGYV---GEDGKGSTLGARDTFLGLQGDWGKVRFGRMLTPL 122
           G R ++D+   +     +E+G+    G+ G+G  +  R  ++GL   +G V  GR     
Sbjct: 59  GLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSSQFGTVTLGRQYD-- 116

Query: 123 YEIVDWPYSNPGLGRVFDWGGDVAGHYD---------RKGDIARYDSPAFGGLTFNISAG 173
             +VD  Y  P L     WGG +A H           R  +  +Y S  +GGLTF  +  
Sbjct: 117 -SVVD--YVGP-LEAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYS 172

Query: 174 RGDV-GTKSSNH-FGAAAHYNAADIVTFHVGYENNSNFKYDYKTKDTAGKDVDNTFLTDA 231
            G + G  +SN  +   A YN   +V   VGY N        +T   AG  + NT  T A
Sbjct: 173 FGGIAGNVTSNQIWSLGAGYNNGPLV-LGVGYLN-------ARTPAAAG-GLFNTGST-A 222

Query: 232 TAYIVGFELPLPAGFGLAGAYK-------YTEGAS 259
            A       P+ AGF  A  Y+       YT GA+
Sbjct: 223 AAPAAAVTSPIYAGFTSANTYQVIGAGGAYTFGAA 257