Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., DNA ligase (NAD+) from Pseudomonas syringae pv. syringae B728a

 Score =  143 bits (360), Expect = 2e-38
 Identities = 148/586 (25%), Positives = 253/586 (43%), Gaps = 75/586 (12%)

Query: 8   LTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVGGRPL 67
           +T L++ + E    Y+ +    I D  YD+  R+ L L  +   + + +S  L+    PL
Sbjct: 37  VTALQQQIAEWDDSYHRQGISQIADELYDQA-RQKLNLWRSCFAVSTPESDPLKTAVGPL 95

Query: 68  DAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLAVSLLYEN 127
                  H +P   ++   D+G ++ + +   D            +PK+DG+AV+L+YE 
Sbjct: 96  P------HPVPHTGVNKLADEGSVKGWLKGRND---------LWIQPKVDGVAVTLVYEK 140

Query: 128 GVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMP-----KAGFE 182
           G L +A +RGDG  G++ T   R IK+I  +L  A+      ++GE++       +A   
Sbjct: 141 GRLVQAISRGDGRKGQDWTSQARLIKAIAQQLPQAESTI---LQGELYWRLDDHIQAASG 197

Query: 183 ALNARALKKG--EKQFVNPRNAAAGSLRQLD----SKITAQRPLAFYAYSVGVIEGGELA 236
           ++NAR+   G   +Q ++P+ A A  L   D        AQR     A      E     
Sbjct: 198 SVNARSKVAGLLARQTISPQQADAIGLFVWDWPNGPADMAQRLAGLQAMG---FEDSAAY 254

Query: 237 TSHYQRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQL 296
           T   + ++Q   W                 + +Y      R  L +  DGV+++      
Sbjct: 255 THPLENYVQAARWR----------------EHWY------RNPLPFATDGVILRQGQRPP 292

Query: 297 QERLGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNA 356
            +R  + A AP W  A+K P  + L  +  V F++GR+G ITPV +L PV +   TVS  
Sbjct: 293 AQR--WQASAPYWIAAWKHPYAQALAEVRKVNFKIGRSGRITPVLELTPVRLDDRTVSRI 350

Query: 357 TLHNADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSDVE 416
           +  +    + L +  GD + +  AG  IP++  VV  R  E A  I+     P      E
Sbjct: 351 STGSLQRWQTLDIRPGDQIAVSLAGLTIPRLDGVV-SRAAERADMII-----PRADDFHE 404

Query: 417 RVEGEAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREMVSTPADLFR 476
               +A         C++Q +  L     +K + + G+G      L+D   +    D   
Sbjct: 405 LSCWQATPG------CESQFRARLAWLSGKKGLALPGVGPGTWNTLIDNGQIMGLLDWMT 458

Query: 477 LRAGELTILERMGPKSAQNVIDALNKAKQTTLPKFLYALGIREVGEATALNLAQHFLSLE 536
           L   EL  +     +S+  ++D+L  A++     +L A+G+   G A    L  ++  L 
Sbjct: 459 LNHAELVNIPGFAERSSAKLLDSLQTARERPFQTWLKAIGLPPTGGA---RLPDNWHELA 515

Query: 537 AIQQASLEQFIEVPDVGVVVASHLQAFFAQDRNQQVINELLEQGIT 582
                S+EQ+   P +G   A+ L+AFF   + Q +  +L  Q I+
Sbjct: 516 G---RSVEQWQAEPGIGPGRAARLRAFFQDPQVQALSQQLQAQSIS 558