Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 717 a.a., NAD-dependent DNA ligase LigA from Sinorhizobium meliloti 1021

 Score =  548 bits (1411), Expect = e-160
 Identities = 320/700 (45%), Positives = 420/700 (60%), Gaps = 45/700 (6%)

Query: 2   SDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61
           ++ A+ L  L   L  H + Y+ +DAP I DA+YD L R    +E   P L+  DSPS +
Sbjct: 14  AEAAEELAFLAAELARHDMLYHGKDAPEISDADYDALKRRNDLIEERFPVLVREDSPSRK 73

Query: 62  VGGRPLDAFESVVHEIPMLSLDNAFDDGELESFYR---RMTDRIPAVQHSAFCCEPKLDG 118
           VG  P   F  VVH  PMLSLDN F D +  +F     R   ++P     AF  EPK+DG
Sbjct: 74  VGAAPSLTFAPVVHARPMLSLDNTFSDEDARAFVAGVYRFLGKLPDGS-IAFTAEPKIDG 132

Query: 119 LAVSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPK 178
           L++SL YEN  L  AATRGDGTTGEN+T NVRTI  IP  L  AD P  +E+RGE++M K
Sbjct: 133 LSMSLRYENRRLVTAATRGDGTTGENVTANVRTIGMIPQTLP-ADAPDVVEIRGEIYMAK 191

Query: 179 AGFEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATS 238
           + F ALNA    +G   +VNPRN A+GSLRQLD+K+TA R L F+AY+ G +     A +
Sbjct: 192 SDFAALNAEMAAQGRPLYVNPRNTASGSLRQLDAKVTANRKLRFFAYAWGEMSAMP-ADT 250

Query: 239 HYQRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQE 298
                   K WG P+ P  +   S  E+   Y  I + R  L Y+IDGVV KVD + LQ 
Sbjct: 251 QLGMVETFKAWGFPVNPLMQRFFSADELLEHYHHIERERPDLDYDIDGVVYKVDRLDLQA 310

Query: 299 RLGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATL 358
           RLGF +R+PRWA A+KFPA++  T L  ++ QVGRTGA+TPVA+LEP+ VGGV V+NATL
Sbjct: 311 RLGFRSRSPRWATAHKFPAEQAFTRLKGIDIQVGRTGALTPVARLEPITVGGVVVTNATL 370

Query: 359 HNADEIERLG-----------VMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTR 407
           HN D I  +G           V +GD V+++RAGDVIPQIV VV++ RPE A+   FPT 
Sbjct: 371 HNEDYIRGVGNTGEPIRDGRDVRIGDMVIVQRAGDVIPQIVDVVMDERPEGAEPYRFPTT 430

Query: 408 CPVCQS----DVERVEG--EAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQ 461
           CP+C S    D+    G  +AV RC+GG +C+AQ  E LKHFVSR A D+EGLG K IE 
Sbjct: 431 CPICGSHAVRDINEKTGKVDAVRRCTGGFVCRAQAVEHLKHFVSRNAFDIEGLGSKQIEF 490

Query: 462 LVDRE----MVSTPADLFRLRAGELTILERM------GPKSAQNVIDALNKAKQTTLPKF 511
             + E     + T  ++F L   +   L ++      G  S + + +A+N  +   L + 
Sbjct: 491 FFESEDENLRIRTAPEIFTLERRQEASLNKLENTDGFGKVSVRKLYEAINARRSIALHRL 550

Query: 512 LYALGIREVGEATALNLAQHFLSLEAIQQASLE----------QFIEVPDVGVVVASHLQ 561
           +YALGIR VGE TA  LA+ + S E    A  E          +   +  +G VVA  + 
Sbjct: 551 IYALGIRHVGETTAKLLARSYGSYEHFGAAMTEAAGFSGDAWNELNSIDGIGEVVARAIV 610

Query: 562 AFFAQDRNQQVINELLEQGITWPALTAAPVAVDSALAGKIVVLTGSFTQLSRNDAKAALQ 621
            F+ + RN +V++ELL++    P     PVA DS +AGK VV TGS  +++R +AKA  +
Sbjct: 611 EFYKEPRNLKVVSELLQE--VTPESAELPVATDSPVAGKTVVFTGSLEKMTREEAKAKAE 668

Query: 622 ALGAKVTGSVSKNTDMVFAGEAAGSKLAKATELGIQVFDE 661
           +LGAKV GSVSK TD+V AG  AGSKL KA ELG+Q  DE
Sbjct: 669 SLGAKVAGSVSKKTDIVVAGPGAGSKLDKARELGVQTMDE 708