Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., DNA ligase LigA from Phaeobacter inhibens DSM 17395

 Score =  481 bits (1239), Expect = e-140
 Identities = 308/739 (41%), Positives = 407/739 (55%), Gaps = 75/739 (10%)

Query: 2   SDVAQ-RLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSL 60
           SD A+ R   L+  L    + Y+  D P I DA+YD   RE   L    PEL    +   
Sbjct: 14  SDEARARFLLLQDELRAADLAYHQADDPEISDADYDAKKREYRALAEHFPELADGATALE 73

Query: 61  RVGGRPLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIP--AVQHSAFCCEPKLDG 118
            VG      F  + H   M+SL NAFDD ++  F + +   +   A    A+  EPK+DG
Sbjct: 74  TVGAPVASGFGKITHAQRMMSLGNAFDDEDVRDFDKGLRKYLGLGASDPLAYTAEPKIDG 133

Query: 119 LAVSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPK 178
           L++SL YENG L  AATRGDG  GEN+TEN RTI  IP  +  A  P  LEVRGEV+M  
Sbjct: 134 LSLSLRYENGKLIHAATRGDGAVGENVTENARTIADIPQEIAAA--PAVLEVRGEVYMSH 191

Query: 179 AGFEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATS 238
             F ALN R   +G K F NPRNAAAGSLRQL+++IT  RPL F+AYS G +    LA +
Sbjct: 192 EDFAALNDRHAAQGGKTFANPRNAAAGSLRQLNAEITRSRPLRFFAYSWGELSE-PLAET 250

Query: 239 HYQRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQE 298
            ++   +L+  G    P TK  ++   + A Y+ I  +R +L Y+IDGVV KVD + LQ 
Sbjct: 251 QFEALTRLREMGFQTNPLTKYCSTTDALIAQYRLIEAQRATLGYDIDGVVYKVDALALQA 310

Query: 299 RLGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATL 358
           RLGF +  PRWAIA+KFPA+   T L  ++ QVGRTGA++PVA+L+PV VGGV VSNATL
Sbjct: 311 RLGFRSTTPRWAIAHKFPAELAWTRLEGIDIQVGRTGALSPVARLQPVTVGGVVVSNATL 370

Query: 359 HNADEIERL-----------GVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTR 407
           HN D I  L            + +GD V + RAGDVIP+I  V L +RPE+A    FP  
Sbjct: 371 HNEDYIAGLDSKGEEIRDGKDIRIGDWVQVYRAGDVIPKIADVDLPKRPEDAVPFAFPAA 430

Query: 408 CPVCQSDVERVEGEAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREM 467
           CP C SD  R EG+AV RC+GGLIC AQ  E LKHFVSRKA D++GLG K IE      +
Sbjct: 431 CPECGSDAVREEGDAVRRCTGGLICPAQAVEKLKHFVSRKAFDIDGLGAKQIEAFYGDAV 490

Query: 468 --VSTPADLFRLRAGELTILERM------GPKSAQNVIDALNKAKQTTLPKFLYALGIRE 519
             + TPAD+F L+A +   L ++      G  SA N+  A+ + ++  L + ++ LGIR 
Sbjct: 491 LTIKTPADIFTLQARDAKTLAKLKNRDGWGETSAANLFAAIEEKRRIELARLIFGLGIRH 550

Query: 520 VGEATALNLAQHFLSLEAI-------QQASLEQFI--EVPDVGVVVAS----HLQAFFAQ 566
           VGE  A +LA H+   +A+       + A+L Q    E  D   V A+      +   A+
Sbjct: 551 VGEVGARDLALHYADWDAMAAAVDTARPAALAQRAADEAEDRERVAAAQENRRARIKEAR 610

Query: 567 DRNQQVINELLEQGITWPALT-----AAPVAV---------------------------- 593
           DR    +N   E    W  LT      A + V                            
Sbjct: 611 DRAVATLNVPSEARAAWDDLTGIDGIGATLGVSLSDAFANTEERAAFDALRGHLDIIPPE 670

Query: 594 ----DSALAGKIVVLTGSFTQLSRNDAKAALQALGAKVTGSVSKNTDMVFAGEAAGSKLA 649
               DS + G  VV TG+  +++R +AKA  + LGAKV GSVSK TD++ AG  AGSK  
Sbjct: 671 APQNDSPVTGLTVVFTGTLEKMTRAEAKARAEGLGAKVAGSVSKKTDILVAGPGAGSKEQ 730

Query: 650 KATELGIQVFDEQALIEFL 668
           KA +LG+++ DE   +E +
Sbjct: 731 KARDLGVRILDEDGWLELI 749