Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 796 a.a., DNA ligase, NAD-dependent from Dechlorosoma suillum PS

 Score =  545 bits (1404), Expect = e-159
 Identities = 291/609 (47%), Positives = 395/609 (64%), Gaps = 26/609 (4%)

Query: 7   RLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVGGRP 66
           R   LR  L  H   YYV DAP++PDAEYDRL REL  LEA +PEL+S+DSP+ RVGG+P
Sbjct: 10  RAAALRAELESHNHAYYVLDAPTVPDAEYDRLFRELQALEAEYPELLSADSPTQRVGGKP 69

Query: 67  LDAFESVVHEIPMLSLDNAFDDGELESFY--RRMTDRIPAVQHSA---FCCEPKLDGLAV 121
           LD+F SV H +PMLS+    D     +F    R+   +   + +A   +  E K DGLAV
Sbjct: 70  LDSFPSVSHAVPMLSIQTETDTEPSGAFNFDARVRKELELEEGAAPVEYAAELKFDGLAV 129

Query: 122 SLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQG--ADFPTRLEVRGEVFMPKA 179
           SL YE+GVL + ATRGDG +GE++T+N+RT++SIPLRLQG  A  P  LEVRGEV+M + 
Sbjct: 130 SLRYEHGVLVQGATRGDGASGEDVTQNLRTVRSIPLRLQGPAASLPPLLEVRGEVYMRRD 189

Query: 180 GFEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATSH 239
                N +AL +G+K  VNPRN AAGS+RQLD  I A RPL F+AY +G + G  L  +H
Sbjct: 190 DLARYNEKALARGDKTLVNPRNGAAGSIRQLDPAIAASRPLNFFAYGIGAVSGWTLPATH 249

Query: 240 YQRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQER 299
                 L  +GLP+C    +V   A +  F++ +   R SL ++IDGVV KV+ ++LQ R
Sbjct: 250 AGLLDALAAFGLPVCQHRDVVRGAAGLADFHRRMGALRDSLPFDIDGVVYKVNSLELQAR 309

Query: 300 LGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATLH 359
           LGF +R PRWA+A+K+PAQE LT++  ++ QVGRTGA+TPVA+L+PVFVGGVTV+NATLH
Sbjct: 310 LGFRSREPRWAVAHKYPAQEALTVVEAIDIQVGRTGALTPVARLQPVFVGGVTVTNATLH 369

Query: 360 NADEIERL-GVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSDVERV 418
           N DE+ R  G+  GDTV++RRAGDVIP++V VV ERRP  A     P  CPVC S V + 
Sbjct: 370 NEDEMARKGGLCTGDTVIVRRAGDVIPEVVGVVAERRPAGATPFQMPRSCPVCGSHVVKE 429

Query: 419 EGEAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREMVSTPADLFRLR 478
           EGEAVARCSGG  C+AQR +A+ HF  R+ MD+EGLG++ +E+LV+ +++   ADL+RL 
Sbjct: 430 EGEAVARCSGGFACRAQRIQAILHFAGRRMMDIEGLGERYVERLVEFDLIHGVADLYRLT 489

Query: 479 AGELTILERMGPKS-----------------AQNVIDALNKAKQTTLPKFLYALGIREVG 521
             +L  ++R+  +                  A+N++  +  +K   L + L+ALGIR VG
Sbjct: 490 LADLLEMKRLADERDGVTPETVKQGQIATRWAENLLAGIAASKTPPLARLLFALGIRHVG 549

Query: 522 EATALNLAQHFLSLEAIQQASLEQFIEVPDVGVVVASHLQAFFAQDRNQQVINELLEQGI 581
           E+TA  LA    SL  +++A       +PD+G  VA+ +  FFA+  N   ++ LL  G+
Sbjct: 550 ESTAKTLADWLGSLAVVRRAPAPLLAALPDIGATVATAIADFFAEPHNAAAVDALLAAGV 609

Query: 582 TWPALTAAP 590
             PA   AP
Sbjct: 610 A-PADEHAP 617



 Score = 80.1 bits (196), Expect = 4e-19
 Identities = 58/155 (37%), Positives = 79/155 (50%), Gaps = 1/155 (0%)

Query: 514 ALGIREVGEATALNLAQHFLSLEAIQQASLEQFIEVPDVGVVVASHLQAFFAQDRNQQVI 573
           ALGI  +    A  LA      E +  A     +E+  +   VA+ + A+  ++ N+  +
Sbjct: 633 ALGIPRLTPVRARQLADLVPEGEGLA-ALAPGCLELAALPAEVATAVLAWLEEEGNRARL 691

Query: 574 NELLEQGITWPALTAAPVAVDSALAGKIVVLTGSFTQLSRNDAKAALQALGAKVTGSVSK 633
             L        A   A       LAG   VLTG+   L R++AKA ++A G KV+GSVSK
Sbjct: 692 TALAALRRELLAALPAQALGPRPLAGLTFVLTGTLPTLKRDEAKARIEAQGGKVSGSVSK 751

Query: 634 NTDMVFAGEAAGSKLAKATELGIQVFDEQALIEFL 668
            TD V AGE AGSKL  A +LG+ V DE AL+  L
Sbjct: 752 KTDYVVAGEEAGSKLENALKLGVPVLDETALLNLL 786