Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 691 a.a., DNA ligase [NAD dependent] LigA (polydeoxyribonucleotide synthase [NAD+]) from Mycobacterium tuberculosis H37Rv

 Score =  509 bits (1310), Expect = e-148
 Identities = 306/686 (44%), Positives = 409/686 (59%), Gaps = 34/686 (4%)

Query: 3   DVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRV 62
           +V ++   L + + EH  RYYV DAP I DAE+D L+R L  LE  HPEL + DSP+  V
Sbjct: 12  EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLV 71

Query: 63  GGRPLDA-FESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLAV 121
           GG      FE V H   MLSLDNAF   EL ++  R+   +    H  + CE K+DG+A+
Sbjct: 72  GGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAH--YLCELKIDGVAL 129

Query: 122 SLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQ-GADFPTR--LEVRGEVFMPK 178
           SL+Y  G LTRA+TRGDG TGE++T N RTI  +P RL  G D+P    LEVRGEVF   
Sbjct: 130 SLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRL 189

Query: 179 AGFEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATS 238
             F+ALNA  +++G+  F NPRN+AAGSLRQ D  +TA+R L    + +G +EG   AT 
Sbjct: 190 DDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATL 249

Query: 239 HYQRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQE 298
           H Q +L L+ WGLP+   T L T LA V+       + R  + +EIDGVV+KVD++ LQ 
Sbjct: 250 H-QAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQR 308

Query: 299 RLGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATL 358
           RLG  +RAPRWAIAYK+P +E  T L D+   VGRTG ITP A + PV V G TV  ATL
Sbjct: 309 RLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATL 368

Query: 359 HNADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSDV-ER 417
           HNA EI+R GV++GDTVVIR+AGDVIP+++  V+E R  + +  + PT CP C S +   
Sbjct: 369 HNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPE 428

Query: 418 VEGEAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLG---------DKVIEQ------L 462
            EG+A  RC     C  Q +E + H  SR  +D+E LG          KVI        L
Sbjct: 429 KEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFAL 488

Query: 463 VDREMVSTPADLFRLRAGELTILERMGPKSAQNVIDALNKAKQTTLPKFLYALGIREVGE 522
            +R+++ T  DLFR +AGEL+        + + ++  L+KAK   L + L AL IR VG 
Sbjct: 489 TERDLLRT--DLFRTKAGELS-------ANGKRLLVNLDKAKAAPLWRVLVALSIRHVGP 539

Query: 523 ATALNLAQHFLSLEAIQQASLEQFIEVPDVGVVVASHLQAFFAQDRNQQVINELLEQGIT 582
             A  LA  F SL+AI  AS +Q   V  VG  +A+ +  +FA D +++++++    G+ 
Sbjct: 540 TAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVR 599

Query: 583 WPALTAAPVAVDSALAGKIVVLTGSFTQLSRNDAKAALQALGAKVTGSVSKNTDMVFAGE 642
              +     +V   LAG  +V+TGS T  SR+DAK A+ A G K  GSVSK T+ V AG+
Sbjct: 600 --MVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGD 657

Query: 643 AAGSKLAKATELGIQVFDEQALIEFL 668
           + GSK  KA ELG+ + DE      L
Sbjct: 658 SPGSKYDKAVELGVPILDEDGFRRLL 683