Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., DNA ligase B from Klebsiella michiganensis M5al

 Score = 98.6 bits (244), Expect = 7e-25
 Identities = 112/467 (23%), Positives = 190/467 (40%), Gaps = 57/467 (12%)

Query: 108 SAFCCEPKLDGLAVSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTR 167
           S    +PK+DG+A++L+Y  G LT+A +RG+G TGE+ T  V  I SIP    G    + 
Sbjct: 117 SGLWVQPKVDGVAITLVYRQGRLTQAISRGNGLTGEDWTARVLQIPSIPKTSDGVLANSV 176

Query: 168 LEVRGEVFMPKAGFEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAF-YAYS 226
           L+  GE+F+ + G        +        N R+  AG + + +++    R   F +A+ 
Sbjct: 177 LQ--GELFLLREGHVQKRMGGM--------NARSKVAGMMMRQEAQAELDRLGIFIWAWP 226

Query: 227 VGVIEGGE-LATSHYQRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEID 285
            G  +  + LA      FL    +  P       V    +V+ + Q  L     L +  D
Sbjct: 227 DGPEDMEQRLALLRQGGFLYSTLFSHP-------VADAQQVERWRQRWLT--SPLPFATD 277

Query: 286 GVVIKVDDIQLQERLG--FVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKL 343
           GVV++    + +E  G  +      W IA+K+P    +  +  + F VGR+G I  VA L
Sbjct: 278 GVVVR----RAKESAGRYWAPGQGDWVIAWKYPPASRVMEVRGISFSVGRSGKIAVVALL 333

Query: 344 EPVFVGGVTVSNATLHNADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIV 403
           EP  +    V    + +      L + VGD + I  AG  IP+I SVV            
Sbjct: 334 EPQLLDDKRVQRVNVGSVSRWYNLDIGVGDQLQISLAGQGIPRIDSVVWR---------- 383

Query: 404 FPTRCPVCQSDVERVEGEAVARCSGGLICQAQRKEALKHFV-------SRKAMDVEGLGD 456
                       +R + +  A     L C     E  + F+       SR  +D++G G+
Sbjct: 384 ----------TAQRNKPQPPAARFNALTCYFATPECAEQFLSRLVWLSSRSVLDIDGAGE 433

Query: 457 KVIEQLVDREMVSTPADLFRLRAGELTILERMGPKSAQNVIDALNKAKQTTLPKFLYALG 516
            +   L D   +             L  +  +  +  Q +    N A++    +++ A+G
Sbjct: 434 ALWRTLHDARSMEHLFSWLAFTPERLQSIPGISAQRGQRLWHQFNLARERPFLRWIQAIG 493

Query: 517 IREVGEATALNLAQHFLSLEAIQQASLEQFIEVPDVGVVVASHLQAF 563
           +  + +     L +       +Q  + EQ+  +P +G   A  L  F
Sbjct: 494 V-PIPKMAFAGLKED--DWRRMQDRNEEQWRRLPGIGAERARQLVTF 537