Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 799 a.a., DNA ligase, NAD-dependent (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  583 bits (1503), Expect = e-170
 Identities = 321/669 (47%), Positives = 429/669 (64%), Gaps = 13/669 (1%)

Query: 3   DVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRV 62
           +  QR  +LR  L  H   YY  D P I DAEYD L REL+ LE   P L    SP+ RV
Sbjct: 38  EARQRAAQLRADLERHNRLYYELDTPEISDAEYDALYRELVGLETRWPALRDEASPTQRV 97

Query: 63  GGRPLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLAVS 122
           GG  L+  E   H + M SLDNAF   E  +F +RM + +P    SAF C+PK+DGLA+ 
Sbjct: 98  GGEVLEGLEKQAHTLRMYSLDNAFSRDEWGAFIQRMYNALPDAP-SAFWCDPKMDGLALE 156

Query: 123 LLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAGFE 182
           ++YENGV T A TRG+G  GE +T  +RT++++PL L+G D P R+EVRGEV + KA FE
Sbjct: 157 VIYENGVFTSALTRGNGEVGEVVTAAMRTVRNLPLALRGDDVPRRIEVRGEVVIAKADFE 216

Query: 183 ALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVG--VIEGGELA-TSH 239
            LNAR    G K F NPRNAAAGS+RQLD+ +TA RPL F AY VG  V+EGG    T+H
Sbjct: 217 QLNARQSAAGGKLFANPRNAAAGSVRQLDTTVTAGRPLQFLAYGVGQVVLEGGTAPWTTH 276

Query: 240 YQRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQER 299
                +L+ WG    PE +L  S  EV A+Y+ +  RR+SLA EIDGVV K+DD + QE 
Sbjct: 277 SGLMARLREWGFDTPPEGRLCASPDEVWAYYEALGARRESLAIEIDGVVAKLDDTEAQEA 336

Query: 300 LGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATLH 359
           LGF ARAPRWA+A KFPA +  T L+D+  QVGRTG +TPVA LEPV VGGV VS ATLH
Sbjct: 337 LGFTARAPRWALALKFPAMQARTRLDDIRVQVGRTGVLTPVAILEPVRVGGVEVSRATLH 396

Query: 360 NADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSDVERVE 419
           N DEI   G+M+GD V+++RAGDVIP++V  ++E R  + +  VFP  CP C S V R +
Sbjct: 397 NEDEIRAKGLMLGDMVLVQRAGDVIPEVVRPLVEERTGDERPFVFPENCPECDSPVVRPQ 456

Query: 420 GEAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREMVSTPADLFRLRA 479
           GE   RC   ++C A R++++ HFVS+  +DV G+G++ ++QLVD   V++P  LF L  
Sbjct: 457 GEVAHRCV-NVMCPAVRRQSIIHFVSKAGLDVRGVGERWVQQLVDGGHVTSPVGLFLLTK 515

Query: 480 GELTILERMGPKSAQNVIDALNKAKQ-TTLPKFLYALGIREVGEATALNLAQHFLSLEAI 538
            +L   ERMGP SA N + AL+ A+   TL + + ALGIR VGE TA  LA +F  L+A+
Sbjct: 516 LDLMRFERMGPTSAANFVTALDAARTGATLVRLICALGIRHVGEQTARTLAANFTDLDAL 575

Query: 539 QQASLEQFIEVPDVGVVVASHLQAFFAQDRNQQVINELLEQGITWPALTAAPVAVDSA-- 596
           ++A  E   ++PD+G  VA  +++FFA + N +++  L   G+ WP    AP A + A  
Sbjct: 576 READAETLQQLPDIGPEVAGSIRSFFANEGNLELLERLRAIGL-WPKRQDAPPASEGADA 634

Query: 597 ----LAGKIVVLTGSFTQLSRNDAKAALQALGAKVTGSVSKNTDMVFAGEAAGSKLAKAT 652
               L G  V+ TGS T++ R +A+   +A GA +  SV+K+ D++  G   GSKL KA 
Sbjct: 635 IVLPLQGLKVLFTGSLTRVGRTEAEDMARAAGANIASSVTKSLDLLVVGGKPGSKLEKAR 694

Query: 653 ELGIQVFDE 661
           +LGI+V +E
Sbjct: 695 KLGIRVMEE 703