Pairwise Alignments

Query, 322 a.a., cysteine synthase A from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., cysteine synthase A (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  330 bits (845), Expect = 4e-95
 Identities = 178/317 (56%), Positives = 231/317 (72%), Gaps = 13/317 (4%)

Query: 1   MSKIYEDNSLTIGNTPLVRLNKV--SNG---KVLAKIEARNPSFSVKCRIGANMIWEAEK 55
           M KI    +  +GNTPL+ L+    SNG   +++ KIE+ NP+ SVK R+   MI +AE 
Sbjct: 1   MEKIARKLTDLVGNTPLLELSNYNKSNGLKARLIVKIESFNPAGSVKDRVALAMIEDAEM 60

Query: 56  QGKLKPGVELVEPTSGNTGVALAFVAAARGYKLTLTMPESMSLERRKLLKALGANLELTE 115
           +G L PG  ++EPTSGNTGV LAFVAAA+GYKL LTMP++MS+ERR LLKALGA L LT 
Sbjct: 61  KGVLTPGATIIEPTSGNTGVGLAFVAAAKGYKLILTMPDTMSVERRNLLKALGAELVLTP 120

Query: 116 AAKGMKGAIAKAEEIVASNPEKYLLLQQFNNPANPQIHEKTTGPEIWDATDGQIDVFVAG 175
            A GMKGAIAKAEE+ A+ P   ++LQQF NPANP +H +TTG EIW  T+G++D+FVAG
Sbjct: 121 GADGMKGAIAKAEELKAATPGS-VILQQFENPANPAMHLRTTGLEIWRDTEGKVDIFVAG 179

Query: 176 VGTGGTLTGTSRYIKGTQGKAILSVAVEPAESPVITQALAGEEIKPAPHKIQGIGAGFIP 235
           VGTGGT++G    +K  +  ++ +VAVEPA+SPV++        KP PHKIQGIGAGF+P
Sbjct: 180 VGTGGTISGVGEALK-MRDPSVKAVAVEPADSPVLSGG------KPGPHKIQGIGAGFVP 232

Query: 236 GNLDLSLIDRVERVTSDEAIEMARRLMEEEGILAGISSGAAVVAANRIAQLPEFEGKTIV 295
              + S++D + +V +D+AI  +R L EEEG+L GISSGAAV AA  +A+ PE EGK IV
Sbjct: 233 KTYNASVVDEIIQVQNDDAIRTSRALAEEEGLLVGISSGAAVYAATELAKRPENEGKMIV 292

Query: 296 TVLPSSGERYLSTALFA 312
            +LP +GERYLST L+A
Sbjct: 293 ALLPDTGERYLSTILYA 309