Pairwise Alignments

Query, 322 a.a., cysteine synthase A from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., cysteine synthase A (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  307 bits (787), Expect = 2e-88
 Identities = 174/317 (54%), Positives = 217/317 (68%), Gaps = 13/317 (4%)

Query: 1   MSKIYEDNSLTIGNTPLVRLNKVS-----NGKVLAKIEARNPSFSVKCRIGANMIWEAEK 55
           M+KI    +  +GNTPL+ L+  S     N  ++AK+EA NP+ SVK R+  +MI +AE 
Sbjct: 2   MAKIANKLTDLVGNTPLMELSGYSGKYGLNQNIIAKLEAFNPAGSVKDRVALSMIEDAEA 61

Query: 56  QGKLKPGVELVEPTSGNTGVALAFVAAARGYKLTLTMPESMSLERRKLLKALGANLELTE 115
           +G LKPG  ++EPTSGNTGV LA VA  +GY L LTMPE+MSLERR LLKALGA + LT+
Sbjct: 62  RGALKPGATIIEPTSGNTGVGLAMVATIKGYHLILTMPETMSLERRNLLKALGAQIVLTD 121

Query: 116 AAKGMKGAIAKAEEIVASNPEKYLLLQQFNNPANPQIHEKTTGPEIWDATDGQIDVFVAG 175
              GM  +IAKA+E+  S P   ++LQQF NP+N  +HE+TTG EIW  TDG++ VFVAG
Sbjct: 122 GLGGMAASIAKAQELRDSIPGS-VILQQFENPSNAAVHERTTGEEIWRDTDGEVAVFVAG 180

Query: 176 VGTGGTLTGTSRYIKGTQGKAILSVAVEPAESPVITQALAGEEIKPAPHKIQGIGAGFIP 235
           VGTGGT+ G +R +K      +  VAVEPA SP+    LAG +   A H+IQGIGA FIP
Sbjct: 181 VGTGGTICGVARALK-KHNPDVHIVAVEPASSPI----LAGGQ--AASHRIQGIGANFIP 233

Query: 236 GNLDLSLIDRVERVTSDEAIEMARRLMEEEGILAGISSGAAVVAANRIAQLPEFEGKTIV 295
              D S++D V  V  DEAI   R L   EG+LAGISSGAAV AA ++AQ PEF  K IV
Sbjct: 234 KLYDASVVDEVIGVPDDEAIRAGRELAATEGLLAGISSGAAVYAARQLAQRPEFRNKKIV 293

Query: 296 TVLPSSGERYLSTALFA 312
            +LP +GERYLST LFA
Sbjct: 294 ALLPDTGERYLSTELFA 310