Pairwise Alignments

Query, 85 a.a., phosphocarrier protein HPr from Vibrio cholerae E7946 ATCC 55056

Subject, 837 a.a., N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) (from data) from Pseudomonas fluorescens FW300-N2C3

 Score = 45.8 bits (107), Expect = 8e-10
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 5   QVEITAENGLHTRPAAQFVKEAKAFDADITVTSNGKSASAKSLFKLQTLGLVKGTVVTIS 64
           QV I    GLH RPAA   + A+ F +   +  +GKSAS  S+  +  L + +   V +S
Sbjct: 175 QVRIAHRGGLHARPAALVRQTAQGFKSRSQLHFSGKSASCDSVMGMMGLAITEQAQVHVS 234

Query: 65  AEGPQAKEAVEHLV-----ALMDQLH 85
             G  A+ A++ L+     AL+++ H
Sbjct: 235 CRGSDAEAALQALLTTLSTALVEEAH 260