Pairwise Alignments

Query, 397 a.a., 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 (NCBI) from Rhodospirillum rubrum S1H

 Score =  217 bits (553), Expect = 4e-61
 Identities = 135/392 (34%), Positives = 201/392 (51%), Gaps = 9/392 (2%)

Query: 10  GMSGNKFDILVVGGGMVGAAAALGFARQGRKVAVIDSGAPHAFEPSQPMDVRVSAISQTS 69
           G +    D+L+VGGG+VG   A   A +G  V VID   P A   +   D R SAI+   
Sbjct: 23  GSADKVADVLIVGGGLVGGTLACALAEKGVSVVVIDGEDPEALLAAG-YDGRCSAIALAC 81

Query: 70  VGLLEELGAWSSVVGMRACPYRHLETWEHPECRTRFSCESLGLPQLGYMVENRVIQLALW 129
             LL+ +G W  ++G  + P   +   +          ++     +GYMVENR+++ A+ 
Sbjct: 82  QRLLDTIGLWD-LLGGESQPILDIRVVDGGSPLFLHYAQAEAQGPMGYMVENRLLRQAIL 140

Query: 130 QQFAAYPQLTLMCPEQLAQLNVSAEGCRVTLQSGAEIECDWVIGADGANSQVRNLVRIGV 189
            +    P  TL+ P ++  L    +G   TL  G  +    V+GADG  SQVR    IG+
Sbjct: 141 TRLGRLPAATLLAPARMTALRRDLDGVSATLSDGQTVRARLVVGADGRRSQVRESAGIGI 200

Query: 190 TAWDYRQHCMLINVQTEQIQQETTWQQFFPTGPRSYLPLGGNQASLVWYDTPQRIRKLSG 249
               Y Q  +++ V+ E+  +    + F P GP + LP+ GN++SLVW +    +  L  
Sbjct: 201 RTLGYGQTAIVLTVEHERSHRGCAVEHFLPAGPFAILPMPGNRSSLVWTERSDLVPGLLA 260

Query: 250 LNPEQLRSEILQYFPAELGNIK-VLQHGAFPLTRRHAQQYVKNRCILIGDAAHTINPLAG 308
           L  E  ++E+ + F   LG ++ V    ++ LT + A +YV +R  L+GDAAH ++P+AG
Sbjct: 261 LPAEHFQAELERRFGDHLGWVRPVGPRFSYRLTLQAANRYVDHRLALVGDAAHGMHPVAG 320

Query: 309 QGVNLGFKDVAVL---LAQTQEQALN---QASFERYERCRRPDNLLMQTGMDLFYKTFSN 362
           QG+N G +DVAVL   L   Q   L+    A    YE  RRPDNLLM    D   + FSN
Sbjct: 321 QGMNYGLRDVAVLAERLVAAQRLGLDPGAPALLAEYEALRRPDNLLMLAITDALVRLFSN 380

Query: 363 SFTPVRFVRNVALALAERSGPLKTQVLRYALG 394
              PV   R + +   ER GPLK   +R+A+G
Sbjct: 381 DIAPVALARRLGIGAVERMGPLKRLFMRHAMG 412