Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., tRNA-i(6)A37 methylthiotransferase from Pseudomonas fluorescens FW300-N2E2

 Score =  598 bits (1541), Expect = e-175
 Identities = 298/442 (67%), Positives = 351/442 (79%), Gaps = 1/442 (0%)

Query: 1   MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVF 60
           M+KKL I+T GCQMNEYDSS+M DLL      E+T   E+ADV+LLNTCSIRE+AQ++V+
Sbjct: 13  MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY 72

Query: 61  HQLGRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQT 120
            QLGRW+ LK   P +VI VGGCVA+QEG +IRDRAPYVDV+FGPQTLHRLPEMI  +++
Sbjct: 73  SQLGRWRELKLANPEMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARS 132

Query: 121 SDAPVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD 180
           +  P +D+SFPEIEKFD LPEPR +GP+A+VS+MEGCSKYCT+CVVPYTRGEEVSRP DD
Sbjct: 133 TKLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD 192

Query: 181 VLFEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFTTSH 240
           V+ EI  LAE GVREV LLGQNVN YRG THDG +   AEL+R+VA +DGIDRIR+TTSH
Sbjct: 193 VIAEIIHLAENGVREVTLLGQNVNGYRGLTHDGRLADLAELIRVVAAVDGIDRIRYTTSH 252

Query: 241 PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI 300
           PLEF+D +I  + + PELV  LHLPVQSGSDRIL  MKR HTA+EYKS +RKLR A P I
Sbjct: 253 PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGI 312

Query: 301 QISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVKKE 360
            ISSDFIVGFPGET+KDFQ TMKLI DV FD S+SF++S RPGTPAAD   D  EE+KKE
Sbjct: 313 CISSDFIVGFPGETEKDFQQTMKLIEDVGFDFSYSFVYSQRPGTPAADLADDTPEELKKE 372

Query: 361 RLYELQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRTENNRVVNFE-GSPDLI 419
           RL  LQ ++N Q    SR M+G+ QRILV   SKKD  EL+GRTENNR+VNF   +P LI
Sbjct: 373 RLNALQHRLNQQGFEISRQMVGSVQRILVTDYSKKDPGELQGRTENNRIVNFRCDTPALI 432

Query: 420 GQFVDVKIVDVFPNSLRGELLR 441
           GQF DV I    P+SLRG L++
Sbjct: 433 GQFADVHIDAAQPHSLRGSLIQ 454