Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase from Pseudomonas fluorescens FW300-N2E2

 Score =  155 bits (392), Expect = 3e-42
 Identities = 122/397 (30%), Positives = 206/397 (51%), Gaps = 39/397 (9%)

Query: 11  GCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKTLK 70
           GC     DS ++   L    GY++    ++ADV+++NTC   + A+ +    +G      
Sbjct: 18  GCPKALVDSERILTQLRM-EGYDVVSTYQDADVVVVNTCGFIDSAKAESLEVIGE----A 72

Query: 71  DKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQ---SQTSDAPVMD 127
            K+ G VI V GC+  +EG+ IR+  P V  + GPQ   ++   +      +    P++D
Sbjct: 73  IKENGKVI-VTGCMGVEEGN-IRNVHPSVLSVTGPQQYEQVVNAVHDVVPPRQDHNPLID 130

Query: 128 ISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFEIAQ 187
           +  P+  K      PR     A++ I EGC+  C++C++P  RG+ VSRP+ DVL E  +
Sbjct: 131 LVPPQGIKLT----PRHY---AYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQR 183

Query: 188 LAEQGVREVNLLGQNVNAY------RGATHDGGICS--FAELLRLVATIDGIDRIRFTTS 239
           L + GV+E+ ++ Q+ +AY      R    +G        EL   ++T+    R+ +   
Sbjct: 184 LVKAGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHYV-- 241

Query: 240 HPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSI--IRKLRKAR 297
           +P    D++I +     +++ +L +P Q  S ++L  MKRP  A E K++  I+  R+  
Sbjct: 242 YPYPHVDELIPLMA-AGKILPYLDIPFQHASPKVLKAMKRP--AFEDKTLARIKNWREIC 298

Query: 298 PDIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCD-LSEE 356
           PD+ I S FIVGFPGET++DFQ  +  + +   D    F +SP  G PA D   D + ++
Sbjct: 299 PDLIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLDVVPDD 358

Query: 357 VKK---ERLYELQQQINSQAMRYSRLMLGTEQRILVE 390
           VK+   ER    QQ I+S  +   ++ +G E ++LV+
Sbjct: 359 VKQDRWERFMAHQQAISSARL---QMRIGREIKVLVD 392