Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., ribosomal protein S12 methylthiotransferase RimO from Pseudomonas stutzeri RCH2

 Score =  145 bits (366), Expect = 3e-39
 Identities = 119/394 (30%), Positives = 196/394 (49%), Gaps = 33/394 (8%)

Query: 11  GCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKTLK 70
           GC     DS ++   L    GY++    E+ADV+++NTC   + A+ +    +G      
Sbjct: 13  GCPKATVDSERILTQLRM-EGYQIVPSYEDADVVVVNTCGFIDSAKAESLDAIGE----A 67

Query: 71  DKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQ---SQTSDAPVMD 127
             + G VI V GC+   E ++IR   P V  + GPQ   ++   + +         P +D
Sbjct: 68  IAENGKVI-VTGCMGVDE-NNIRGVHPSVLAVTGPQQYEQVVNAVHEVVPPNIEHDPFVD 125

Query: 128 ISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFEIAQ 187
           +  P+  K      PR     A++ I EGC+  C++C++P  RG+ VSRP+ DVL E  +
Sbjct: 126 LVPPQGIKLT----PRHY---AYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAER 178

Query: 188 LAEQGVREVNLLGQNVNAYR-----GATHDGGICSFAELLRLVATIDGIDR-IRFTTSHP 241
           L + GV+EV ++ Q+ +AY            G      +L L   +  +   +R    +P
Sbjct: 179 LVKAGVKEVLVISQDTSAYGVDLKYKLDFWNGQPVKTRMLELCEELGKMGVWVRLHYVYP 238

Query: 242 LEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSI--IRKLRKARPD 299
               DD+I +     +++ +L +P Q  S ++L  MKRP  A E K++  I+K R+  P+
Sbjct: 239 YPNVDDVIPLMA-AGKILPYLDIPFQHASPKVLKAMKRP--AFEDKTLARIKKWREICPE 295

Query: 300 IQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCD-LSEEVK 358
           + I S FIVGFPGET++DFQ  +  + +   D    F +SP  G PA     + + +E+K
Sbjct: 296 LTIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVDGAPAEVMGLEAVPDEIK 355

Query: 359 KERLYELQQQINSQAMRYSRLML--GTEQRILVE 390
           +ER        + QA+  +RL L  G E  +L++
Sbjct: 356 QERWDRF--MAHQQAISAARLQLKVGQEMDVLID 387