Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase from Xanthomonas campestris pv. campestris strain 8004

 Score =  159 bits (401), Expect = 3e-43
 Identities = 125/462 (27%), Positives = 220/462 (47%), Gaps = 41/462 (8%)

Query: 1   MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVF 60
           ++ K+   + GC     DS ++   L    GY++    + ADV+++NTC   + A  +  
Sbjct: 169 LNPKVGFVSLGCPKALVDSERILTQLRV-EGYDIVPSYDAADVVVVNTCGFIDSAVTESL 227

Query: 61  HQLGRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQS-Q 119
             +G       K     + V GC+  +  + IR+  P V  + GPQ    + E +  +  
Sbjct: 228 DAIGEAMNANGK-----VIVTGCLGKRP-EQIREAYPQVLAVSGPQDYQSVMEAVHAALP 281

Query: 120 TSDAPVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMD 179
               P +D+    +  +     PR     A++ I EGC+  C++C++P  RG+  SRP+D
Sbjct: 282 PRHDPFVDL----VPDYGIKLTPRHY---AYLKISEGCNHRCSFCIIPSMRGDLASRPVD 334

Query: 180 DVLFEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAEL--------LRLVATIDGI 231
           +VL E  +L   GV+E+ ++ Q+ +AY      G    +AE          R+ A  +G+
Sbjct: 335 EVLREAERLVRGGVKELLVVSQDTSAY------GVDLKYAERPWRDRMYQTRMKALCEGL 388

Query: 232 DRIRFTTS----HPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYK 287
             +   T     +P    DD+I +  +  +L+ +L +P Q  S RIL +MKRP    +  
Sbjct: 389 SELGVWTRLHYVYPYPHVDDVIPLMAEG-KLLPYLDIPFQHASPRILKLMKRPGAVEKTL 447

Query: 288 SIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAA 347
             +++ +   P+I + S FIVGFPGETD +F+  ++ +     D   +F +SP  G  A 
Sbjct: 448 ERVQRWKAMCPEITVRSTFIVGFPGETDAEFEALLEFLDQAQLDRVGAFAYSPVEGASAN 507

Query: 348 DYPCDLSEEVKKERLYELQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRT--- 404
             P  + EE+K+ERL     +    +       +G+ Q+ LV+   + D+   R R    
Sbjct: 508 ALPDPVPEELKQERLARFMARQAEISAARLEAKIGSVQQCLVD-LIEDDIAVARSRADAP 566

Query: 405 ENNRVVNFEGSPDL---IGQFVDVKIVDVFPNSLRGELLRTE 443
           E + +V+ +   +L   +G  VDV+I D   + L G+ L ++
Sbjct: 567 EIDGLVHIQNGGELKLKVGDLVDVEITDSDEHDLFGDALPSD 608