Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., MiaB-like putative RNA modifying enzyme YliG (RefSeq) from Shewanella amazonensis SB2B

 Score =  154 bits (389), Expect = 6e-42
 Identities = 140/456 (30%), Positives = 221/456 (48%), Gaps = 50/456 (10%)

Query: 11  GCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKTLK 70
           GC  N  DS ++   L   +GYE+T   + AD++++NTC   + A E+    +   + L+
Sbjct: 64  GCPKNLVDSERILTQLRI-DGYEVTNSYDNADLVIVNTCGFIDAAVEESLDAVR--EALE 120

Query: 71  DKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDAPVMDISF 130
           +   G VI V GC+  +E + IR+  P V  I GP +   +   + +          +  
Sbjct: 121 EN--GKVI-VTGCLGAKE-NQIREVHPDVLEITGPHSYEAVLNHVHKY---------VPK 167

Query: 131 PEIEKFDRLPEPRAEGPT----AFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFEIA 186
           PE   F  L        T    A++ I EGC   CT+C++P  RG+  SR +  VL E  
Sbjct: 168 PEHNPFTSLIPQTGVKLTPKHYAYLKISEGCDNRCTFCIIPALRGDLDSRGVGSVLDEAK 227

Query: 187 QLAEQGVREVNLLGQNVNAYRGATHDG------GICSFAELLRLVATIDGIDR-IRFTTS 239
           +L E GV+E+ ++ Q+ +AY G   DG      G+    ++  L   +  +   +R    
Sbjct: 228 RLVESGVQEILVVSQDTSAY-GKDKDGRTDFWNGMPVKQDITSLARQLGKMGAWVRLHYV 286

Query: 240 HPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPD 299
           +P  + DD+I +  +   ++ +L LP+Q  S R+L MMKRP         I+K R+  PD
Sbjct: 287 YPYPWVDDLIPLMAEGL-ILPYLDLPLQHASPRVLKMMKRPGRVDRQLDAIKKWREICPD 345

Query: 300 IQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVKK 359
           + I S FIVGFPGET++DF+  +  +R+   D    F +S   G  A      +SEEVK+
Sbjct: 346 LVIRSTFIVGFPGETEEDFEMLLDFLREARLDRVGCFKYSEVDGAVANTLAELISEEVKE 405

Query: 360 ---ERLYELQQQINSQAMRYSRLMLGTEQRILVE--------GPSKKDLMELRGRTENNR 408
              ER  E+Q +I+++  R +RL +G E  IL++        G S  D  E+ G      
Sbjct: 406 DRYERFMEVQAEISAE--RLARL-VGRELDILIDDVDEEGAIGRSYADAPEIDG------ 456

Query: 409 VVNFEGSPDLI-GQFVDVKIVDVFPNSLRGELLRTE 443
           +V   G  +L  G  V  +IV    + L  EL+  E
Sbjct: 457 MVFINGETELTPGDMVRARIVASDEHDLWAELVALE 492