Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  153 bits (386), Expect = 1e-41
 Identities = 118/382 (30%), Positives = 191/382 (50%), Gaps = 25/382 (6%)

Query: 3   KKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQ 62
           +K+ I + GC     DS ++   L A  GYE++   ++A+V+++NTC   + A+ +    
Sbjct: 6   QKVGIVSLGCPKALVDSERILTRLRA-EGYEVSPTYDDANVVIVNTCGFLDSAKAESLEA 64

Query: 63  LGRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQT-S 121
           +G        + G VI V GC+   E  +IR   P V  + GPQ   R+   + ++   +
Sbjct: 65  IGEAMA----QNGRVI-VTGCMGGDEA-AIRSAHPGVLAVTGPQQYERVVAAVHEAAPPA 118

Query: 122 DAPVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDV 181
             P +D+   E  +      PR     A++ I EGC+  CT+C++P  RG+ VSRP   V
Sbjct: 119 HDPYLDLVPAEGIRLT----PRHY---AYLKISEGCNHGCTFCIIPDLRGKLVSRPASKV 171

Query: 182 LFEIAQLAEQGVREVNLLGQNVNAY-----RGATHDGGICSFAELLRLVATIDGIDR-IR 235
           L E  +LAE GVRE+ ++ Q+ +AY      G +   G    A +  L + +  +   +R
Sbjct: 172 LMEAEKLAEAGVRELLVISQDTSAYGVDLRHGESPWHGAPVKARMTELCSALGELGIWVR 231

Query: 236 FTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRK 295
               +P  F D+II +  +  +++ +L +P Q  S +IL  MKRP         IR+ R 
Sbjct: 232 LHYVYPYPFVDEIIPLMAEG-KILPYLDIPFQHASPKILEAMKRPAAQDRTLERIRRWRT 290

Query: 296 ARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSE 355
             PDI + S FIVGFPGET+ DFQ  +  + + + D    F +    G  A      + E
Sbjct: 291 ICPDIALRSTFIVGFPGETEDDFQQLLDWMGEAELDRVGCFKYEAVAGAKANALADAVPE 350

Query: 356 EVKKERLYEL---QQQINSQAM 374
           EVK+ER +     QQ+I+ + +
Sbjct: 351 EVKEERWHRFMAAQQEISERRL 372