Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., MiaB-like tRNA modifying enzyme (NCBI) from Rhodospirillum rubrum S1H

 Score =  173 bits (439), Expect = 9e-48
 Identities = 116/398 (29%), Positives = 198/398 (49%), Gaps = 30/398 (7%)

Query: 7   IKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRW 66
           I T+GC++N Y+S  M +    A           +D +++NTC++  +A+ +    + R 
Sbjct: 25  IVTFGCRLNTYESEVMREQAAKAG---------LSDAIIVNTCAVTREAERQARQTIRR- 74

Query: 67  KTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDAPVM 126
             L+ + P   + V GC A  +        P VD + G +      ++  +S    A  +
Sbjct: 75  --LRRENPETRLIVTGCGAQLDPKGW-GAMPEVDQVLGNEE-----KLKAESYRPLAGGL 126

Query: 127 DISFPEIEKFDRLPEPRA---------EGPT-AFVSIMEGCSKYCTYCVVPYTRGEEVSR 176
           D+  PE    D +   R          EG   AFV + +GC   CT+C++P+ RG   S 
Sbjct: 127 DLGAPEKILVDDIMTVRETALHLVGGFEGRARAFVQVQQGCDHRCTFCIIPFARGNSRSV 186

Query: 177 PMDDVLFEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRF 236
           PM  ++ +I  L   G REV L G ++ AY G    G       + RL+  +  + R+R 
Sbjct: 187 PMGRIVDQIRALVAAGYREVVLTGVDITAY-GPDLPGAPSLGQMVRRLLRAVPDLPRLRL 245

Query: 237 TTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKA 296
           ++  P+E  +D++A+    P L++ LHL VQ+G+D IL  MKR H   +  ++ ++LR  
Sbjct: 246 SSLDPVEVDEDLLALVASEPRLLAHLHLSVQAGADLILKRMKRRHLRDDVIALAQRLRTL 305

Query: 297 RPDIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEE 356
           RP + + +D IVGFP ET++ F  ++ L+ +        F +SPRPGTPAA  P  + + 
Sbjct: 306 RPGMALGADIIVGFPTETEEHFAQSLALVEEAGLTHLHVFPYSPRPGTPAALMP-QVDKA 364

Query: 357 VKKERLYELQQQINSQAMRYSRLMLGTEQRILVEGPSK 394
           V K+R   L++   +    +  +++G    +L+E P +
Sbjct: 365 VVKDRARRLREAGEAALAAHRAVLVGGIDHVLIERPGE 402