Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., (dimethylallyl)adenosine tRNA methylthiotransferase MiaB from Phaeobacter inhibens DSM 17395

 Score =  393 bits (1010), Expect = e-114
 Identities = 210/440 (47%), Positives = 291/440 (66%), Gaps = 7/440 (1%)

Query: 3   KKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQ 62
           KKL IKT+GCQMN YDS +MA+ L    GY  T+ P++AD++LLNTC IREKA EKV+ +
Sbjct: 5   KKLFIKTYGCQMNVYDSERMAEALGG-EGYVETKSPDDADMILLNTCHIREKAAEKVYSE 63

Query: 63  LGRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSD 122
           LGR+K LK +KP + IGV GCVA  EG  I  R P VD++ GPQ+ HRLPEM  +++  +
Sbjct: 64  LGRFKGLKAEKPDLKIGVAGCVAQAEGQEIMRRQPLVDLVVGPQSYHRLPEMEAKAREGE 123

Query: 123 APVMDISFPEIEKFDRLPE-PRAE-GPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD 180
             V+D  FPE +KF++L   P+A+ GPTAF+++ EGC K+C +CVVPYTRG EVSRP D 
Sbjct: 124 K-VLDTDFPEEDKFEKLKNRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADR 182

Query: 181 VLFEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFTTSH 240
           +L E   L E+GVRE+ LLGQNVNAY GA  +G + + A+L+  +  +DG++RIRFTTSH
Sbjct: 183 ILREAQDLVERGVREITLLGQNVNAYHGAGPNGDM-TLAQLIWELDKVDGLERIRFTTSH 241

Query: 241 PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI 300
           P +  DD+I  +    +L+ +LHLPVQ+GSD+IL  M R HTA  Y  +I ++R ARPDI
Sbjct: 242 PNDMQDDLIEAHGTCAKLMPYLHLPVQAGSDKILKRMNRAHTAESYLRLIERIRAARPDI 301

Query: 301 QISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVKKE 360
            IS DFIVGFP ET+ DFQ T+ L+ +V +  ++SF +S RPGTPAA+ P  +  +   +
Sbjct: 302 LISGDFIVGFPEETEADFQATLDLVEEVKYGTAYSFKYSTRPGTPAAERP-QVDPKEADD 360

Query: 361 RLYELQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRTENNRVVNFEGSPDLIG 420
           RL  LQ  + +Q       M+G +  +L E   +    ++ G+++    V+       IG
Sbjct: 361 RLQRLQALLTTQQREVQDSMVGRDVTVLFEKAGRFP-GQMVGKSDYLHAVHVADCDRAIG 419

Query: 421 QFVDVKIVDVFPNSLRGELL 440
               V+I+    NSL G L+
Sbjct: 420 DLARVRILSSGANSLAGALI 439