Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., MiaB-like tRNA modifying enzyme from Phaeobacter inhibens DSM 17395

 Score =  163 bits (413), Expect = 9e-45
 Identities = 116/420 (27%), Positives = 194/420 (46%), Gaps = 26/420 (6%)

Query: 9   TWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKT 68
           T GC++N Y++  M +L   A            + +++NTC++  +A  K   ++   + 
Sbjct: 9   TLGCRLNAYETEAMKELSQQAG---------LQNAVVVNTCAVTAEAVRKARQEI---RK 56

Query: 69  LKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVI-----FGPQTLHRLPEMIKQSQTSDA 123
           L+ + P   I V GC A  E ++         VI        QT  ++ +      T++ 
Sbjct: 57  LRRENPEAPIIVTGCAAQTEPETFAAMDEVTQVIGNTEKMQAQTWQQIAKGPDFIGTTEK 116

Query: 124 PVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLF 183
             +D      E    L +       A+V +  GC   CT+C++PY RG   S P   V+ 
Sbjct: 117 VQVDDIMSVTETAGHLIDGFGTRSRAYVQVQNGCDHRCTFCIIPYGRGNSRSVPAGVVVD 176

Query: 184 EIAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFTTSHPLE 243
           +I +L ++G  EV L G ++ ++ GA           ++R++  +  + R+R ++   +E
Sbjct: 177 QIKRLVDRGYNEVVLTGVDLTSW-GADLPATPKLGDLVMRILKLVPDLPRLRISSIDSIE 235

Query: 244 FTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQIS 303
             D+++      P L+  LHL +Q G D IL  M R H   +      + RK RP++   
Sbjct: 236 VDDNLMQAIATEPRLMPHLHLSLQHGDDLILKRMARRHLRDDAIRFCEEARKLRPEMTFG 295

Query: 304 SDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVKKERLY 363
           +D I GFP ETD  F++++KL+ D D      F +S R GTPAA  P  ++  + KER  
Sbjct: 296 ADIIAGFPTETDAHFENSLKLVSDCDLTWLHVFPYSKREGTPAARIPSQVNGPLIKERAA 355

Query: 364 ELQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRTENNRVVNFEGSPDLIGQFV 423
            L+   ++Q   +    +G   +IL+E P         GRTE    V F  +P + GQ V
Sbjct: 356 RLRAAGDAQVQTHLTAAVGKAHQILMENPH-------MGRTEQFTEVTF-AAPQIEGQIV 407