Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase from Methanococcus maripaludis JJ

 Score =  157 bits (396), Expect = 9e-43
 Identities = 118/446 (26%), Positives = 225/446 (50%), Gaps = 32/446 (7%)

Query: 4   KLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63
           K+ I+ +GC +N  D+  + + +N    +ELT+  +++D++++NTC +R++ + ++  ++
Sbjct: 2   KIYIEGYGCTLNTADTEIIKNSVNEFEDFELTDNVDDSDIIVINTCIVRQETEHRMISRI 61

Query: 64  GRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDA 123
             +K+L DKK    + V GC+A      I + A   DV+  P+       ++K     D 
Sbjct: 62  EYFKSL-DKK----VVVAGCMAKALSKKIENLA---DVLIMPREAQHSGNILKDKLLKDC 113

Query: 124 ------PVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRP 177
                    +++F E    +++ +  ++G    + I EGC   CTYC+V   RG  VS  
Sbjct: 114 FEKNNESTQNLNF-EDRLNEKIKKVSSQGLITALPICEGCLGSCTYCIVKRARGNLVSYD 172

Query: 178 MDDVLFEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFT 237
            D ++ +  +L + G + + +  Q+   Y    +D    + + L+  ++ I     +R  
Sbjct: 173 RDLIVKKAEELVKTGTKCLLVTAQDTACYGLDNND----NLSNLINDISEIPEKFAMRIG 228

Query: 238 TSHPL---EFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLR 294
             H        D++I  ++ + ++V FLHLP+QSG D++L  M R +T  E+ S++ + +
Sbjct: 229 MMHAKFAEPILDELIESFK-SEKVVKFLHLPIQSGDDQVLKDMNRNYTVDEFISVLNEFK 287

Query: 295 KARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLS 354
               ++  ++D IVGFP ET++ FQ+T+++++ +  D + +  +S R  T AA     + 
Sbjct: 288 SKIKNLNFTTDVIVGFPTETEEAFQNTLEIVKKIKPDFTHAAKYSQRKYTKAAVLK-QVD 346

Query: 355 EEVKKERLYELQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRTENNRVVNFEG 414
            +++KER   L +     +   ++  +G    ILV     KD M   G T+N + V FE 
Sbjct: 347 TKIRKERSEILNELRRELSYENNKRHIGETFEILV----TKDNM---GVTDNCKNVIFE- 398

Query: 415 SPDLIGQFVDVKIVDVFPNSLRGELL 440
            P  IG+F   KI       L G+L+
Sbjct: 399 EPTKIGEFKRAKITGAKTFGLSGKLI 424