Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  744 bits (1921), Expect = 0.0
 Identities = 372/474 (78%), Positives = 410/474 (86%)

Query: 1   MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVF 60
           MSKKL IKTWGCQMNEYDSSKMADLL    GY LTE  EEAD+LLLNTCSIREKAQEKVF
Sbjct: 1   MSKKLHIKTWGCQMNEYDSSKMADLLGEYQGYTLTEEAEEADILLLNTCSIREKAQEKVF 60

Query: 61  HQLGRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQT 120
           HQLGRWKTLKDK P ++IGVGGCVA+QEG +I+DRA  VD+IFGPQTLHRLPEMI+Q + 
Sbjct: 61  HQLGRWKTLKDKNPDLIIGVGGCVASQEGKAIKDRAQCVDIIFGPQTLHRLPEMIEQVRR 120

Query: 121 SDAPVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD 180
            +  V+D+SFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYC++CVVPYTRGEEVSRP DD
Sbjct: 121 GEKAVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPSDD 180

Query: 181 VLFEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFTTSH 240
           ++ EIAQLAEQGVREVNLLGQNVNAYRGATHDGGIC+FAELLR VA IDGIDRIRFTTSH
Sbjct: 181 IILEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICTFAELLRYVAAIDGIDRIRFTTSH 240

Query: 241 PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI 300
           P+EFT DII VYEDTPELVSFLHLPVQSGSDRILT MKR H AIEYKSIIR+LRKARPDI
Sbjct: 241 PIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTAMKRGHMAIEYKSIIRRLRKARPDI 300

Query: 301 QISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVKKE 360
           QISSDFI+GFPGET +DF DTMKLI DV FD SFSFI+S RPGTPAAD P D+  E KK+
Sbjct: 301 QISSDFIIGFPGETQEDFADTMKLIEDVAFDHSFSFIYSARPGTPAADLPDDVDMEEKKQ 360

Query: 361 RLYELQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRTENNRVVNFEGSPDLIG 420
           RL  LQ +I  QAMRYSR M+GT QRILVEGPS K+ MELRGRTENNRVVNFEG P  IG
Sbjct: 361 RLAILQDRITQQAMRYSRHMMGTVQRILVEGPSVKNPMELRGRTENNRVVNFEGLPKHIG 420

Query: 421 QFVDVKIVDVFPNSLRGELLRTEQEMNLRIATSPSEMKAKTRREDELGVATFTP 474
            FVDV+IVDV+ NSLRG+ +R E EM+LR    PS++ AK +++D+LGV  F P
Sbjct: 421 TFVDVEIVDVYTNSLRGKFIRGEDEMDLRRNLRPSDILAKHKQDDDLGVTQFKP 474