Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., tRNA-i(6)A37 modification enzyme MiaB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  294 bits (752), Expect = 5e-84
 Identities = 176/440 (40%), Positives = 251/440 (57%), Gaps = 12/440 (2%)

Query: 7   IKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRW 66
           I+T+GCQMN  DS  +A  L    G+      E A + ++NTCS+R+K ++KV+  LGR 
Sbjct: 8   IETFGCQMNVNDSDWLARAL-MERGFSPAPFGE-ARLTIVNTCSVRDKPEQKVYSLLGRI 65

Query: 67  KTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQS-QTSDAPV 125
           +    KKP   + VGGCVA Q G     R P V ++FG   L   P+ + +  +  D  +
Sbjct: 66  RQATSKKPDAFVAVGGCVAQQIGSGFFSRFPQVRLVFGTDGLAMAPQALDRLVEEPDLKL 125

Query: 126 MDISFPE-IEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFE 184
             + F E   + D +    A   + FV+IM+GC  +C YC+VPYTRG + SR    +L E
Sbjct: 126 SLLDFSEDYPERDAVLGQGAVPASVFVNIMQGCDNFCAYCIVPYTRGRQKSRATGTILDE 185

Query: 185 IAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFTTSHPLEF 244
              L ++G RE+ LLGQNVN++   +H  G  +FA+LL  VA + G++R+RF T HP + 
Sbjct: 186 CRALLDRGAREITLLGQNVNSFGQDSHGDGT-TFAQLLHKVAALPGLERLRFVTPHPKDI 244

Query: 245 TDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISS 304
             +++  +   P L   LHLP+Q+GSDRIL +M R +    Y  I+  LR ARPDI +SS
Sbjct: 245 APEVVEAFGTLPNLCPRLHLPLQAGSDRILKLMGRRYDMARYLRIVDDLRAARPDIVLSS 304

Query: 305 DFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVKKERLYE 364
           D IVGFPGET++DF +TM  +  V +  S+SF +S RPGT A   P  LS EVK ERL  
Sbjct: 305 DIIVGFPGETEEDFMETMDALETVGYAASYSFCYSDRPGTRAEMLPDKLSREVKLERLER 364

Query: 365 LQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLME---LRGRTENNRVVNF---EGSPDL 418
           LQ   N    R  + M+G +  +L+EG S+K   E    +GR     +VN    +GS D+
Sbjct: 365 LQTLQNRLTERCLQDMVGRKVEVLLEGMSRKPGDEGDSWQGRDPYGNLVNVALPQGS-DV 423

Query: 419 IGQFVDVKIVDVFPNSLRGE 438
            G+F+ V +     +SL  E
Sbjct: 424 RGRFLPVVVAQAKKHSLLAE 443