Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., tRNA 2-methylthioadenosine synthase from Caulobacter crescentus NA1000

 Score =  398 bits (1022), Expect = e-115
 Identities = 215/442 (48%), Positives = 287/442 (64%), Gaps = 12/442 (2%)

Query: 3   KKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQ 62
           K+L IKT+GCQMN YDS +MAD+L    GY + + PE AD+++LNTC IREKA EKV+ +
Sbjct: 7   KRLFIKTYGCQMNVYDSERMADVLRPL-GYGVVDEPEGADLVVLNTCHIREKATEKVYSE 65

Query: 63  LGRWKTLKDKKPG----VVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQS 118
           LG  K +KD+K      + I V GCVA  EG  I +R   VD++ GPQ  H+LPE+I ++
Sbjct: 66  LGYIKQMKDRKAEAGGRMTIAVAGCVAQAEGKEIMNRQKAVDLVVGPQAYHQLPELIARA 125

Query: 119 QTSDAPVMDISFPEIEKFDRLPEPR-AEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRP 177
             +    +   F   EKFD LP  R   G TAF+++ EGC K+CT+CVVPYTRG E SRP
Sbjct: 126 HRATGERLAADFAADEKFDALPAERHVTGVTAFLTVQEGCDKFCTFCVVPYTRGGEWSRP 185

Query: 178 MDDVLFEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFT 237
           ++D++ E  +LA+QGVREV LLGQNVNAY     DG   + A+L+R +A IDG+DRIR+T
Sbjct: 186 VNDIVEEAKRLADQGVREVTLLGQNVNAY-----DGDGSTLAKLVRQLAKIDGLDRIRYT 240

Query: 238 TSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKAR 297
           TSHP +  DD+I  + + PEL+ +LHLPVQ+GSD+IL  M R HTA  Y  +I K+R AR
Sbjct: 241 TSHPRDMGDDLIEAHGELPELMPYLHLPVQAGSDKILKAMNRDHTAESYVKLIEKIRAAR 300

Query: 298 PDIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEV 357
           PDI +S DFIVGFPGE D DF+ T++L+R+V F  +FSF +S RPGTPA+  P  + E V
Sbjct: 301 PDIAMSGDFIVGFPGERDGDFEKTLELVREVGFASAFSFKYSRRPGTPASAMPGQVDEAV 360

Query: 358 KKERLYELQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRTENNRVVNFEGSPD 417
           K ERL  L Q ++ Q   ++   +G    +L E   +    ++ GR+   + V+ EG   
Sbjct: 361 KAERLERLNQLLDEQQRAFNASQVGKVLPVLFEKAGRHP-GQIVGRSPYLQAVHAEGGEQ 419

Query: 418 LIGQFVDVKIVDVFPNSLRGEL 439
           LIG  V V I      SL G L
Sbjct: 420 LIGTIVPVHIESAAKMSLAGRL 441