Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., MiaB-like tRNA modifying enzyme YliG (RefSeq) from Shewanella sp. ANA-3

 Score =  149 bits (377), Expect = 2e-40
 Identities = 128/451 (28%), Positives = 211/451 (46%), Gaps = 51/451 (11%)

Query: 11  GCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKTLK 70
           GC  N  DS ++   L   +GYE+T   + AD++++NTC   + A E+    +   + L+
Sbjct: 45  GCPKNLVDSERILTQLRI-DGYEVTNSYDNADLVIVNTCGFIDAAVEESLDAVR--EALE 101

Query: 71  DKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDAPVMDISF 130
           +   G VI V GC+  +E + IR+  P V  I GP +   + + + +          +  
Sbjct: 102 EN--GKVI-VTGCLGAKE-NQIREVHPDVLEITGPHSYEAVLKHVHKY---------VPK 148

Query: 131 PEIEKFDRLPEPRAEGPT----AFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFEIA 186
           PE   F  L        T    A++ I EGC   CT+C++P  RG+  SRP   VL E  
Sbjct: 149 PEHNPFTSLIPQTGVKLTPKHYAYLKISEGCDNRCTFCIIPALRGDLDSRPAGSVLDEAK 208

Query: 187 QLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDR--------IRFTT 238
           +L E GV+E+ ++ Q+ +AY      GG   F   + +   I  + R        +R   
Sbjct: 209 RLVESGVQEILVVSQDTSAY--GKDKGGRTDFWNGMPVKQDITSLARQLGKMGAWVRLHY 266

Query: 239 SHPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARP 298
            +P  + DD+I +  +   ++ +L +P+Q  S RIL MMKRP         I++ R+  P
Sbjct: 267 IYPYPWVDDLIPLMAEGL-ILPYLDIPMQHASPRILKMMKRPGRVDRQLEAIQRWREICP 325

Query: 299 DIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVK 358
           D+ I S FIVGFPGET++DF+  +  +R+   D    F +S   G  A      +SE+VK
Sbjct: 326 DLVIRSTFIVGFPGETEEDFEMLLDFLREARLDRVGCFKYSEVEGAVANTIAELISEDVK 385

Query: 359 KERLY---ELQQQINSQAM-----RYSRLML------GTEQRILVEGPSKKDLMELRGRT 404
           ++R +   E+Q +I+++ +     R   +++      G   R   + P    ++ + G T
Sbjct: 386 EDRYHRFMEVQAEISAERLARFVGRTMDILIDDVDEEGAIGRSFADAPEIDGMVFINGET 445

Query: 405 E------NNRVVNFEGSPDLIGQFVDVKIVD 429
           E         V+      DL  + VD    D
Sbjct: 446 ELEPGMLVRAVITHSDEHDLWAELVDADAED 476