Pairwise Alignments

Query, 291 a.a., magnesium and cobalt efflux protein CorC from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  109 bits (273), Expect = 1e-28
 Identities = 71/257 (27%), Positives = 130/257 (50%), Gaps = 8/257 (3%)

Query: 32  RQELVDVIRDSEVNDLIDHDTRDMLEGVMEIAEMRVRDIMIPRSQMVTIDRTHNLDALVA 91
           ++++  ++++     +I+H+   M++ V  + E  +  +M+PRS +V +D    LDA + 
Sbjct: 176 QEDIQAMLQEGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDANLR 235

Query: 92  IMTDAQHSRYPVISEDKDHVEGILLAKDLLKYLGSNCAPFNIQEVIRPAVVVPESKRVDR 151
            +  + HSR+PV   + D + GI+ AK LL    +      + ++++    VP S     
Sbjct: 236 TVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG-ERLELVDLVKNCNFVPNSLSGME 294

Query: 152 LLKEFREERYHMAIVVDEFGGVSGLVTIEDILEEIVGDIEDEFDDEEQKDIRQLSKHTFS 211
           LL+ FR     M  VVDE+G + GLVT++D+++ + G+   E D  +Q  I++    +  
Sbjct: 295 LLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFFQE-DVNDQMVIKR-EDGSLL 352

Query: 212 VKALTTIEDFNHTFGTKFSDEEVD----TVGGLVMTAFGHLPARGEVVDIAGYNFKVTAA 267
           +  L  I D     G K    E D    T+ G +M   G +P   ++V++AG+  ++   
Sbjct: 353 LDGLIPIFDLKDALGIKQLPNEEDGRYQTLNGFLMYELGKIPQTTDIVEVAGWRLEIMDM 412

Query: 268 DSRRV-VALQVTVPDLE 283
           D +RV   L   +PD E
Sbjct: 413 DGKRVDKVLAQKLPDAE 429