Pairwise Alignments

Query, 291 a.a., magnesium and cobalt efflux protein CorC from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., magnesium and cobalt efflux protein CorC (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  333 bits (855), Expect = 2e-96
 Identities = 171/281 (60%), Positives = 218/281 (77%), Gaps = 3/281 (1%)

Query: 4   DNSQNSEGPSRKSFFERLSQLFQGEPKDRQELVDVIRDSEVNDLIDHDTRDMLEGVMEIA 63
           D+   S    +KS+F+R+SQLFQGEP++R++LVDVI  +E  +LI  DTR+M++GV+E++
Sbjct: 3   DDIPPSTNAQKKSWFDRVSQLFQGEPQNREDLVDVIDGAEQRELISEDTREMIKGVLEVS 62

Query: 64  EMRVRDIMIPRSQMVTIDRTHNLDALVAIMTDAQHSRYPVISEDKDHVEGILLAKDLLKY 123
           +MRVRDIMIPR+Q+V I   + ++ L+  +  + HSR+PV++EDKDH+EGILLAKDL+ Y
Sbjct: 63  DMRVRDIMIPRAQIVAIQIDNTVEELLRTVIGSGHSRFPVVNEDKDHIEGILLAKDLIPY 122

Query: 124 LGSNC-APFNIQEVIRPAVVVPESKRVDRLLKEFREERYHMAIVVDEFGGVSGLVTIEDI 182
             SN   PF++  VIRPAVVVPESKRVD LLKEFR +RYHMAIVVDE+GGVSGLVTIEDI
Sbjct: 123 GFSNSEEPFSLDRVIRPAVVVPESKRVDVLLKEFRSQRYHMAIVVDEYGGVSGLVTIEDI 182

Query: 183 LEEIVGDIEDEFDDE--EQKDIRQLSKHTFSVKALTTIEDFNHTFGTKFSDEEVDTVGGL 240
           LEEIVG+IEDEFD +  E  +IR++    + VKALT IEDFN  F T FSDEE DTVGGL
Sbjct: 183 LEEIVGEIEDEFDHDSPEDTEIRKVGNTVYMVKALTPIEDFNEEFNTHFSDEEFDTVGGL 242

Query: 241 VMTAFGHLPARGEVVDIAGYNFKVTAADSRRVVALQVTVPD 281
           V  AFGHLP R E + I G  FKV  AD+RR++ L+V +PD
Sbjct: 243 VSHAFGHLPERNESIMIEGIEFKVINADTRRLIQLRVKLPD 283